Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_006961.1 Length=2296 Score E Sequences producing significant alignments: (Bits) Value seq62892 150 3e-33 >seq62892 Length=2478 Score = 150 bits (166), Expect = 3e-33 Identities = 405/613 (66%), Gaps = 10/613 (2%) Strand=Plus/Plus Query 964 TTTACCCGAAATCACATTTCCGACCGAGATGGTAATCTCAAACAACGACCTGTCTACGCA 1023 || || || || |||||||| | || ||||| | ||| ||| || || || |||||| Sbjct 1079 TTCACTCGCAACCACATTTCGAAACGTGATGGAATTCTTAAAGTCCGCCCCGTTTACGCA 1138 Query 1024 ATGGACGACCTCTTCATACGACTTGAATCTATGATCACGTTTCCACTCCACGTCATGGCC 1083 | || ||| | || ||| | ||| ||| | || || || | || || Sbjct 1139 GTTGATGACATTTTTATAATCATCGAACTCATGCTTACATTCCCTTTGACTGTTCAAGCT 1198 Query 1084 CGCAAAATCGAATGCTGTATAATGTATGGCTACGAAACAATTCGCGGTTCAAACCGACAA 1143 || ||| | || || ||||||||||| |||||| ||||| |||||||| | | Sbjct 1199 CGAAAACCCTCCTGTTGCATAATGTATGGACTCGAAACTATTCGAGGTTCAAATCATTAC 1258 Query 1144 ATTGACAAGATCGCTTCTTCCT-TCCGCTCTTTCTTCACGATCGACTGGTCTGGATTCGA 1202 ||||| | || ||| | || | || ||| ||| | | || ||||| | | || Sbjct 1259 ATTGAACAAATAGCTCGTGACTATTCGACCTT-CTTTTCTTTAGATTGGTCCAGTTATGA 1317 Query 1203 CCAACGTCTACCACGTGTCATCACTGACATATTCTGGTCTGACTTCCTCGAACGCA---T 1259 ||||| || || || ||||||||||| || | | ||||||| ||| |||| | Sbjct 1318 TCAACGCCTCCCGCGCGTCATCACTGATATTTATTACACTGACTTTCTC---CGCAGTCT 1374 Query 1260 GATCGTCATATCTCATGGCTATCAACCTACATACGATTACCCCTCATACCCCGACCTCAC 1319 || || ||| ||||| || ||||| || || || |||||| | ||||| ||||| Sbjct 1375 TATAGTGATAAACCATGGATACCAACCGACCTATGAATACCCCACTTACCCTGACCTTGA 1434 Query 1320 TCCCGACAAAATGTTCCAACGCATGGACAACATTCTTTTCTTCCTGCATACTTGGTACAA 1379 | |||| ||| | | ||||| || | || | || || || ||||||||||| Sbjct 1435 TGAACACAAGTTGTATGATAGAATGGATAATCTACTCTATTTTCTCCACACTTGGTACAA 1494 Query 1380 CAACCTTGTCTTCGTGACCGC-TGATGGATTTGCATATATCCGTACCTGCGCTGGTGTCC 1438 ||| | | ||| | || | |||||| | ||| || ||| ||||| ||||| | Sbjct 1495 TAACAT-GACTTTCTTACTACCTGATGGTTATGCCTACCGCCGAACCTGTTGCGGTGTAC 1553 Query 1439 CCTCTGGACTACTCAACACGCAATACCTGGATTCTTTCTCAAATCTGTTCCTCATTTTCG 1498 ||||||||||| |||||| |||||||| |||||||| ||||| ||||| || | | Sbjct 1554 CCTCTGGACTATACAACACACAATACCTTGATTCTTTTGGCAATCTATTCCTAATCATAG 1613 Query 1499 ATGGTCTAATTGAATTTGGCTGCTCCGACGCCGAAATCTACCAGATCTTCCTCTTAGTAA 1558 | | | |||||||| || | | || |||||||| | | | ||||| |||| Sbjct 1614 ACGCCATGATTGAATTCGGATTCCTTGATTCCGAAATCGAGAATTTTATCCTCCTAGTTT 1673 Query 1559 TGGGTGACGATAA 1571 | || || ||||| Sbjct 1674 TAGGAGATGATAA 1686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7232658125628