Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_007242.1 Length=1779 Score E Sequences producing significant alignments: (Bits) Value seq72430 700 0.0 seq68663 394 1e-106 >seq72430 Length=393 Score = 700 bits (776), Expect = 0.0 Identities = 391/393 (99%), Gaps = 0/393 (0%) Strand=Plus/Minus Query 529 TATGATTATCCGCATCCTCTCTCACACTGGATATGCCCCTTCCTTCACCGATCTACTCAA 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 393 TATGATTATCCGCATCCTCTCTCACACTGGATATGCCCCTTCCTTCACCGATCTACTCAA 334 Query 589 TACTCTCACTACTGACCTTCAAATTGAAGAGTGTATGGTCCCCGGACCACTAGTCCCCTT 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333 TACTCTCACTACTGACCTTCAAATTGAAGAGTGTATGGTCCCCGGACCACTAGTCCCCTT 274 Query 649 CTTCCAATCCTTGGCCTCTACCAATGGCCCTTTTGACTGGATAGGCGATATCACTCCTGC 708 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 273 CTTCCAATCCTTGGCCTCTATCAATGGCCCTTTTGACTGGATAGGCGATATCACTCCTGC 214 Query 709 CCTCCCTGGATTTGATTCTCTCTGGGATGCCACGAATTTCACTCCGCACGCAAGCTACAC 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 CCTCCCTGGATTTGATTCTCTCTGGGATGCCACGAATTTCACTCCGCACGCAAGCTACAC 154 Query 769 CCGCTTCGTCCCCATTCCTGCCATCTTGTTAGACCAGCTTTACTACTGCGCGACTTACGT 828 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 153 CCGCTTCGTCCCCATTCCTGCCATCTTGCTAGACCAGCTTTACTACTGCGCGACTTACGT 94 Query 829 CGGCGTTAATCAAGGCGACCTCTACCCTACCTTCACTTGGTATAGAAACATTTTCACCCG 888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93 CGGCGTTAATCAAGGCGACCTCTACCCTACCTTCACTTGGTATAGAAACATTTTCACCCG 34 Query 889 CACTGGTGCAAACACTCCTGCTCTCCTCCGCAT 921 ||||||||||||||||||||||||||||||||| Sbjct 33 CACTGGTGCAAACACTCCTGCTCTCCTCCGCAT 1 >seq68663 Length=225 Score = 394 bits (436), Expect = 1e-106 Identities = 223/225 (99%), Gaps = 1/225 (0%) Strand=Plus/Plus Query 1479 ACATGACCCCTTTCCGTCACACCGGACATCTCGGCCTCAAGACTCAGTATGCCCAGCTCA 1538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACATGACCCCTTTCCGTCACACCGGACATCTCGGCCTCAAGACTCAGTATGCCCAGCTCA 60 Query 1539 TCGCTTCTCGCTATCACCAACTTGCCGCCAACCGTGTCGACTGACAACCTCCTGACCTAG 1598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCGCTTCTCGCTATCACCAACTTGCCGCCAACCGTGTCGACTGACAACCTCCTGACCTAG 120 Query 1599 AACGTCAATAAACTTCTAATTTTGCTATCTTTGATAGTTATTCTGATCAGAATAGttttt 1658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AACGTCAATAAACTTCTAATTTTGCTATCTTTGATAGTTATTCTGATCAGAATAGTTTTT 180 Query 1659 tgtttttttCCAACTCCCAACTTAGTTTTCTTTAATACAAATTTT 1703 || |||||||||||| ||||||||||||||||||||||||||||| Sbjct 181 TG-TTTTTTCCAACTTCCAACTTAGTTTTCTTTAATACAAATTTT 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5579570481530