Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_013109.1 Length=2390 Score E Sequences producing significant alignments: (Bits) Value seq62892 1115 0.0 >seq62892 Length=2478 Score = 1115 bits (1236), Expect = 0.0 Identities = 1289/1722 (75%), Gaps = 27/1722 (2%) Strand=Plus/Plus Query 598 TGGAACTGTCGAAGCTACATTCAACGATTTTAATACAGAACAGATTCCATCTGCTCCCAT 657 ||| ||||| || |||||||| |||||||||| ||||||||| |||||||| || || Sbjct 634 TGGTACTGTTGATGCTACATTTTCTGATTTTAATAAAGAACAGATCCCATCTGCCCCTAT 693 Query 658 TGATGAAGATCGCAAACAACAAATTCTCAAACATCTGTTTAAGTTCCTTGATGTTAAACC 717 ||| | | | ||| | ||| | || ||| | | ||||||||||||| ||||| Sbjct 694 TGACTACTACAGAAAAGACCAAGTCCTTGTCCATATACTCAAGTTCCTTGATGCCAAACC 753 Query 718 TTACCTACCGATCCATTTTGTTGATACCCAGTATTGCAAAACCCCACTTGTAACTGGAAC 777 ||||||||| | ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct 754 TTACCTACCCCTTCATTTCGTTGATACCCAGTATTGCAAGACTCCTCTTGTAACTGGAAC 813 Query 778 TGGCTACCACAATCGCTACTCTTTCAAACAGAGAGCACATGCAAAATATTCTCACCCTGA 837 |||||||| |||||||| ||||| ||||||| ||| ||||| || |||||||||||| Sbjct 814 CGGCTACCATAATCGCTATTCTTTTAAACAGAAAGCGCATGCTAAGTATTCTCACCCTCC 873 Query 838 AGAATATGCCCTGAAATCAACTTCAAAAGGCTATTTCTACAACGCTACTTATGAGAATGC 897 | ||||| ||| |||| || ||||| ||||| || || |||||||| |||||||| Sbjct 874 CCAGTATGCAACTAAACCAACCTCCAAAGGTTATTTTTATAATGCTACTTACGAGAATGC 933 Query 898 TCGCACTTTAGTCCATTTGATTAAAACCTATGGTCTTCCTTTTAA-CATGCAGTTCGCAT 956 ||||| ||| | ||||||||||| | | || | || ||||| | | ||| ||| Sbjct 934 CCGCACATTAATTCATTTGATTAAGAAACACGGATTACCATTTAATCCCGTTGTT-GCA- 991 Query 957 GCCCTAAA--TCTGACCTCACTGATGAACAGATTAACCTCTACATTAGTAAAGCTAATCA 1014 || ||| ||||| |||||||| | ||| | | |||| || || || Sbjct 992 -CCTGAAACTTCTGATCTCACTGACTCTGACATTCAGTCTTTCATTGACTCTGCAAA-CA 1049 Query 1015 ATTTTTT-AACGACTACCCGACGTTATTATTCACTCGCAACCACATTTCAAAACGAAGTG 1073 ||| || || || |||||||||||| | |||||||||||||||||||| ||||| || Sbjct 1050 GTTTCTTCAATGATTACCCGACGTTACTGTTCACTCGCAACCACATTTCGAAACGTGATG 1109 Query 1074 GAACCTTAAAAGTTCGACCCGTTTATGCCGTTGATGATATTTTCATTATTATTGAATTAA 1133 ||| | ||||| || |||||||| || |||||||| ||||| || || || ||| | | Sbjct 1110 GAATTCTTAAAGTCCGCCCCGTTTACGCAGTTGATGACATTTTTATAATCATCGAACTCA 1169 Query 1134 TGTTGACTTTCCCGTTAACGATTCAAGCTAGAAAACCTTCATGCTGTATTATGTATGGAT 1193 || | || ||||| || || |||||||| ||||||| || || || || ||||||||| Sbjct 1170 TGCTTACATTCCCTTTGACTGTTCAAGCTCGAAAACCCTCCTGTTGCATAATGTATGGAC 1229 Query 1194 TAGAAACCATTCGTGGCTCTAACCACTATATTGACCGCCTTGCTCGCCCGTATTCGACCT 1253 | ||||| ||||| || || || || || ||||| | | ||||| |||||||||| Sbjct 1230 TCGAAACTATTCGAGGTTCAAATCATTACATTGAACAAATAGCTCGTGACTATTCGACCT 1289 Query 1254 TCTTTTCTTTAGATTGGTCAAGCTATGATCAAAGACTACCACGTGTAATCACTGATATAT 1313 ||||||||||||||||||| || ||||||||| | || || || || ||||||||||| | Sbjct 1290 TCTTTTCTTTAGATTGGTCCAGTTATGATCAACGCCTCCCGCGCGTCATCACTGATATTT 1349 Query 1314 ATTATACTGACTTCCTTCGAAGTTTAATAGTAATTAACCATGGATACCAGCCAACATATG 1373 |||| |||||||| || || ||| | ||||| || |||||||||||||| || || |||| Sbjct 1350 ATTACACTGACTTTCTCCGCAGTCTTATAGTGATAAACCATGGATACCAACCGACCTATG 1409 Query 1374 AATACCCCACCTACCCAGATCTCGATGAACACAAATTATATTCTAGAATGGATAATTTAT 1433 |||||||||| ||||| || || ||||||||||| || ||| ||||||||||||| || Sbjct 1410 AATACCCCACTTACCCTGACCTTGATGAACACAAGTTGTATGATAGAATGGATAATCTAC 1469 Query 1434 TATACTTTCTCCATACCTGGTACAATAATATGACTTTCCTTCTACCCGATGGATATGCAT 1493 | || |||||||| || ||||||||||| ||||||||| | ||||| ||||| ||||| | Sbjct 1470 TCTATTTTCTCCACACTTGGTACAATAACATGACTTTCTTACTACCTGATGGTTATGCCT 1529 Query 1494 ATCGCCGAACGCATTGCGGTGTACCTTCTGGTTTATATAACACTCAATATCTCGATTCTT 1553 | |||||||| |||||||||||| ||||| |||| ||||| ||||| || ||||||| Sbjct 1530 ACCGCCGAACCTGTTGCGGTGTACCCTCTGGACTATACAACACACAATACCTTGATTCTT 1589 Query 1554 TTGGTAATCTATTTTTAATAATTGACGCCATGATAGAATTCGAATTCACTGACGATGAAA 1613 |||| |||||||| |||| || ||||||||||| ||||||| |||| ||| |||| Sbjct 1590 TTGGCAATCTATTCCTAATCATAGACGCCATGATTGAATTCGGATTCCTTGATTCCGAAA 1649 Query 1614 TCTCTAAGTTTCAACTTCTAATTTTAGGAGGTGATAATACTGGAATGACAAACCTCGCCA 1673 || || ||| || ||| ||||||||| |||||| ||||| ||||| | || | | Sbjct 1650 TCGAGAATTTTATCCTCCTAGTTTTAGGAGATGATAACACTGGTATGACGACTATCCCTA 1709 Query 1674 TTGATAGAATTGATAAATTCATCACCTTTCTTGAAACCTATGCGTTAGCACGCTACAATA 1733 | | | || | | |||||||| |||||||||| ||||| | ||| || || | Sbjct 1710 TATGTCGTATGTTTGATTTCATCACTTTTCTTGAAAAATATGCCCTTCAACGGTATAACA 1769 Query 1734 TGGTCCTTCCAAAGACCAAATGCATACTAACGTCATTGCGCTCGAAGATTGTGACCCTTG 1793 |||||||| | |||||||| | | |||||| |||| ||||| || |||| | | || | Sbjct 1770 TGGTCCTTTCTGCGACCAAATCCGTTCTAACGACATTACGCTCAAAAATTGAGTCTCTAG 1829 Query 1794 GTTACGAATGTAACTATGGCTCACCAAAACGCGACATCCACAAGCTTGTTGCCCAACTCT 1853 |||||| |||||| |||| || || || || || ||| | || |||||||||||||||| Sbjct 1830 GTTACGCCTGTAACCATGGATCTCCCAAGCGTGATATCGATAAACTTGTTGCCCAACTCT 1889 Query 1854 GTTTTCCAGAGAATGGCCTTAAAG-CACATACTATGTCTGCCAGAGCAACCGGAATTGCC 1912 ||| ||||||||||| ||||||| |||| || ||| |||||||||||| || ||||| Sbjct 1890 GTTACCCAGAGAATGG-CTTAAAGCCACACACCATGGCTGCCAGAGCAATAGGTATTGCA 1948 Query 1913 TACGCATCCGCCGGACAAGATATAATGTTCCACTCATTCTGCCAAGATGTGTATAACATA 1972 || || ||||| || |||||| | | || ||||| || ||||| ||||| || || ||| Sbjct 1949 TATGCCTCCGCTGGCCAAGATGTTGTATTTCACTCCTTTTGCCAGGATGTATACAATATA 2008 Query 1973 TTTCGATCTGATTACAAACCTGATGTTCGTGCAAATCTGTACTTCCAACGCCAATTCCTC 2032 ||| | ||| ||| ||||| | || | ||||| | |||||||| || || | Sbjct 2009 TTTAGGTCTAGTTATCGCCCTGACGACCGCACTAATCTCTTTTTCCAACGACAGTTGTTT 2068 Query 2033 AACGACCTTGAAGAAGGAGTGCCCGATCTTGCAACGCCCACAGTGCCACCCTTTCCGTCA 2092 || |||||||||| ||| | ||||||||||| |||| | ||||| || ||||| ||| Sbjct 2069 CACAACCTTGAAGATGGAATCCCCGATCTTGCGCCGCCAATTGTGCCCCCGTTTCCTTCA 2128 Query 2093 TTGTATGAAATCCGAAAACTCTACTCCAAGTATCAAGGACCACTCTCCTTTACCCCAAAA 2152 | |||||||||| | |||||| | || | ||| || || | | | || ||| Sbjct 2129 CTCTATGAAATCCAGGACGCCTACTCGTATTACCGAGGTCCTCTGGAATATGCTCCTAAA 2188 Query 2153 TGGAATAGTGCTCATTTCATTAATGAACCAGATTCGGTGCCGATTTCTGCCAAAACTATG 2212 ||||| | ||||||||||| |||| ||||||||| || |||| |||||| Sbjct 2189 TGGAACTATTCTCATTTCATTCATGATCCAGATTCGACACCACCCCACCCCAAGACTATG 2248 Query 2213 CGC------CAATTCGAAGAAGAATTTTCAATTC-CTTTGATGACCGCTGCTACTTTTGA 2265 || || | ||| | | | |||| || | || ||| |||||||||| Sbjct 2249 AGCGCTTATGAAGTTGAACATAATATGTCAACTCGCGTT-------GCTCCTACTTTTGA 2301 Query 2266 AACGGTTGTGCCTTAGCACAAGAAATTTTCCCGTGA-TATTT 2306 |||||| ||||| ||||| ||||| ||| |||||| ||||| Sbjct 2302 AACGGTCGTGCC-CAGCACTAGAAA-TTTGCCGTGATTATTT 2341 Score = 196 bits (216), Expect = 7e-47 Identities = 328/465 (71%), Gaps = 17/465 (4%) Strand=Plus/Plus Query 25 CTTAAAAATTTAGAATTCACATTCGTCTACGATAATCAAGCTCTTTCAAAGCCTCTGCTC 84 |||||| |||||||||||||||||||||| ||| || || || ||| || | Sbjct 11 CTTAAATATTTAGAATTCACATTCGTCTAT--TAA-CATACT-TTGAAAATTAACTTAAC 66 Query 85 --TTA-TATCCCACCCCAACGTCACAACATGCCATTCAACGCTGTTCGTAATTATCTCGC 141 ||| | | | | |||||| || |||||| |||||| | || || ||||| || Sbjct 67 AATTAGTTTTCTAATTTAACGTCTCACCATGCCGTTCAACTCAGTCCGCAATTACCTTAG 126 Query 142 CGAACGATTAGTTCGAGTTAGAACCGAATTGAAGAATTTCACTTCTTCCAATCGTGAACC 201 |||||| || || | | | ||||| |||| || | ||| ||||| ||| || Sbjct 127 CGAACGCTTGACCCGCCTGAAGATTGAATTTAAGACTTACCAGTCTAACAATCATGATCC 186 Query 202 TGATGCAACTCTTGAACTCTCTCAAGATCCCGACTTACGTCGATACTATGATAACACTCG 261 |||| | |||||| | ||||||||||||||| ||||| ||||| || || |||| Sbjct 187 TGATAAGATTCTTGAGCAAACTCAAGATCCCGACTATCGTCGTTACTACGACAATGCTCG 246 Query 262 TTATAACTCTAGTAATGATGCAAAG---TACCGTACCCTCAACAAAGAGTACTCCACTCT 318 |||||| || | || ||| |||| ||| || || || || || || || ||||| Sbjct 247 TTATAA---TAATGATAATGAAAAGAAACACCTTATGCTTAATAAGGAATATTCTACTCT 303 Query 319 AGTCGAAGCATATAGAACTGATAA--CCAACAGAAGCACCAACCTTATGAGCTACATCAA 376 |||||||| ||| | ||||| || || | |||| |||| | ||||| ||||| || Sbjct 304 TGTCGAAGCTTATCGCACTGACAATGCCTCC--AAGCGCCAAACGTATGAACTACACCAG 361 Query 377 CCAATCCCTGCTGATGCTGCCCCTATTATTGACAAACGTCAACCCGCTCCTGGCCTCAAA 436 || ||||| | || |||||||| ||| || | || ||| ||||| ||||| |||| Sbjct 362 CCTGTCCCTTCCGACGCTGCCCCAATTGTTCAAAATCGTATTCCCGCACCTGGAATCAAG 421 Query 437 TTAGTCCCTCTCATGTACCATTATGGACATGTAATTCACGACCCC 481 ||||||| ||||||||||||||||| ||||| | || || ||| Sbjct 422 CTAGTCCCCCTCATGTACCATTATGGTCATGTTACTCGTGATCCC 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7533219515464