Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021096.1 Length=2430 Score E Sequences producing significant alignments: (Bits) Value seq62892 1703 0.0 >seq62892 Length=2478 Score = 1703 bits (1888), Expect = 0.0 Identities = 1826/2392 (76%), Gaps = 34/2392 (1%) Strand=Plus/Plus Query 14 GCGGCCCCCGCCCTAATATTTAGAATTCACATTCGTCTACTAATTTTCCTACAAAAT-AA 72 ||||||||| | ||||||||||||||||||||||||| ||| | | | ||||| || Sbjct 1 GCGGCCCCCCCTTAAATATTTAGAATTCACATTCGTCTATTAACATACTTTGAAAATTAA 60 Query 73 CTGCTCACCCTTTTATTTTTACT--AACGTCTAACCATGCCGTTCAACTCTGCTCGCAAT 130 || | || || ||| || | ||||||| ||||||||||||||||| | |||||| Sbjct 61 CT--TAACAATTAGTTTTCTAATTTAACGTCTCACCATGCCGTTCAACTCAGTCCGCAAT 118 Query 131 TATCTTGCGGAACGTATGATTCGCACCAAACAAGAACTTATGACTTACCAGTCAGAAGAT 190 || ||| ||||| ||| ||| || ||| ||| |||||||||||| | || Sbjct 119 TACCTTAGCGAACGCTTGACCCGCCTGAAGATTGAATTTAAGACTTACCAGTCTAACAAT 178 Query 191 CACAATCCCGATGCTATTCTTGAGAAATCTCAAGATCCAGATTATCGTCGCTACTACGAC 250 || |||| ||| ||||||||| || |||||||||| || |||||||| ||||||||| Sbjct 179 CATGATCCTGATAAGATTCTTGAGCAAACTCAAGATCCCGACTATCGTCGTTACTACGAC 238 Query 251 AATACTCGTTTCGACCCCTCTAATGAGGTCAAACATCGCATCCTTAATAAGGAATACTCC 310 ||| |||||| | |||||| ||||| | || |||||||||||||| || Sbjct 239 AATGCTCGTTATAATAATGATAATGAAAAGAAACACCTTATGCTTAATAAGGAATATTCT 298 Query 311 ACACTAGTAGAAGCTTATCGTATTAAAAACGATAGAAAACACCAGCCTTATGAATTACAT 370 || || || ||||||||||| | | | || | || | ||| | |||||| |||| Sbjct 299 ACTCTTGTCGAAGCTTATCGCACTGACAATGCCTCCAAGCGCCAAACGTATGAACTACAC 358 Query 371 CAGCCTATCCCTGAAGATGCTGCCCCAATTCCTGAATCTCGTGTCCCAGCTCCTGGTCTG 430 |||||| ||||| || |||||||||||| | || |||| | || || ||||| | Sbjct 359 CAGCCTGTCCCTTCCGACGCTGCCCCAATTGTTCAAAATCGTATTCCCGCACCTGGAATC 418 Query 431 AAACTTGTTCCTTTAATGTACCACTATGGTCATATTGTCCATGACCCTGTTGCTT---CC 487 || || || || | |||||||| ||||||||| || | ||| || | || | Sbjct 419 AAGCTAGTCCCCCTCATGTACCATTATGGTCATGTTACTCGTGATCCCACTCCTCAGCCT 478 Query 488 GAATCAGATTCCGATGATGATAATACTGCC-TCCGAAAGGCCAAGTAAGACATCGATCCC 546 ||| |||| || ||||||| ||||| | | | | | | | || | | Sbjct 479 GAACAAGATACCTTTGATGATT---CTGCCGTTCTACTTGACCCACATGTACCCGTTTCA 535 Query 547 TCATTTT--GGATATCCCGTTAATAAGCGCATCTATGATGTAAT-TGTTAATGTATACCC 603 || | |||| || || || | | |||||| | | || |||| | |||||| Sbjct 536 ACAAACTACGGATTCCCAATTGATGATCAAATCTATCAACTTATCTGTTTCAG-ATACCC 594 Query 604 TGAATATTTAAAAGTGATTGGTGAATACTGCCGCCCAATTGGAACTGTTGAGGCTACTTT 663 | ||||| | || || || ||||| || || ||| |||||||| ||||| || Sbjct 595 TCAATATCTGAATGTTATAAACTCGTACTGTCGACCCTCTGGTACTGTTGATGCTACATT 654 Query 664 TGCTGACTTTAACAAGGAACAGATTCCCTCTGCCCCTATTAA-TATTGAAAGGAAAGAAC 722 | |||| ||||| || |||||||| || |||||||||||| | || | | || ||||| | Sbjct 655 TTCTGATTTTAATAAAGAACAGATCCCATCTGCCCCTATTGACTACT-ACAGAAAAGACC 713 Query 723 AAGTGTTAACCCACATTTTTAAATTCCTAGATGCTCAGCCATACCTCCCGCTCCATTTTG 782 |||| | ||| || | || ||||| ||||| | || ||||| || || ||||| | Sbjct 714 AAGTCCTTGTCCATATACTCAAGTTCCTTGATGCCAAACCTTACCTACCCCTTCATTTCG 773 Query 783 TTGATACCCAGTTTTGCAAGACCCCTCTTGTTACTGGAACCGGCTATCATAATCGCTATT 842 |||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct 774 TTGATACCCAGTATTGCAAGACTCCTCTTGTAACTGGAACCGGCTACCATAATCGCTATT 833 Query 843 CTTTTAAACAGAAAGCGCATGCGAAATATTCTCGCCCCGAAGAGTATGCTAAACTA--CC 900 |||||||||||||||||||||| || ||||||| ||| ||||||| ||||| || Sbjct 834 CTTTTAAACAGAAAGCGCATGCTAAGTATTCTCACCCTCCCCAGTATGC--AACTAAACC 891 Query 901 AACCTCTAAAGGTTATTTTTACAATGCTACTTATGAGAATGCTCGTACCCTGGTCCATTT 960 |||||| |||||||||||||| ||||||||||| |||||||| || || | | ||||| Sbjct 892 AACCTCCAAAGGTTATTTTTATAATGCTACTTACGAGAATGCCCGCACATTAATTCATTT 951 Query 961 CATAAAACAGTTTGGATTACCATTCAATCTGCAATATGCTCCTGAAGATGCTGACCCTAC 1020 || || | ||||||||||| |||| ||| |||||| | |||| | || Sbjct 952 GATTAAGAAACACGGATTACCATTTAATCCCGTTGTTGCACCTGAAACTTCTGATCTCAC 1011 Query 1021 CGA---TGAACAGGTTCAATCCTACATCGACACTGCTAATAGCTTCTTTAATGACTATCC 1077 || ||| || |||| || | ||| ||| |||| || || ||||| ||||| || || Sbjct 1012 TGACTCTGA-CA--TTCAGTCTTTCATTGACTCTGCAAACAGTTTCTTCAATGATTACCC 1068 Query 1078 GACGTTATTGTTCACTCGCAACCACATTTCTAAACGTGATGGAACTCTTAAAGTCCGCCC 1137 ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1069 GACGTTACTGTTCACTCGCAACCACATTTCGAAACGTGATGGAATTCTTAAAGTCCGCCC 1128 Query 1138 CGTTTATGCTGTTGATGATTTATTTATCATCATTGAACTTATGCTGACATTTCCATTGAC 1197 |||||| || |||||||| | ||||| ||||| ||||| ||||| ||||| || ||||| Sbjct 1129 CGTTTACGCAGTTGATGACATTTTTATAATCATCGAACTCATGCTTACATTCCCTTTGAC 1188 Query 1198 TGTACAAGCTCGCAAACAGTCCTGTTGCATTATGTATGGTTTAGAAACCATTCGTGGTTC 1257 ||| |||||||| |||| ||||||||||| |||||||| | ||||| ||||| ||||| Sbjct 1189 TGTTCAAGCTCGAAAACCCTCCTGTTGCATAATGTATGGACTCGAAACTATTCGAGGTTC 1248 Query 1258 AAACCATTACATTGAACGCTTAGCTCGTTCGTATTCGACCTACTTCTCCCTAGATTGGTC 1317 ||| ||||||||||||| |||||||| |||||||||| ||| || |||||||||| Sbjct 1249 AAATCATTACATTGAACAAATAGCTCGTGACTATTCGACCTTCTTTTCTTTAGATTGGTC 1308 Query 1318 CAGTTATGACCAACGCTTACCCCGCGTCATTACTGATATTTATTACACTGACTTCCTCCG 1377 ||||||||| |||||| | || |||||||| ||||||||||||||||||||||| ||||| Sbjct 1309 CAGTTATGATCAACGCCTCCCGCGCGTCATCACTGATATTTATTACACTGACTTTCTCCG 1368 Query 1378 AAGATTAATTGTAATTAACCATGGATACCAACCGACCTATGAATACCCCACCTACCCTGA 1437 || | || || || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1369 CAGTCTTATAGTGATAAACCATGGATACCAACCGACCTATGAATACCCCACTTACCCTGA 1428 Query 1438 CCTTGATGAACACAAACTGTACTCTAGAATGAATAATCTTTTATACTTTCTTCATACATG 1497 ||||||||||||||| |||| ||||||| ||||||| | || ||||| || || || Sbjct 1429 CCTTGATGAACACAAGTTGTATGATAGAATGGATAATCTACTCTATTTTCTCCACACTTG 1488 Query 1498 GTACAATAACATGACTTTCGTTTTATCTGATGGTTATGCCTACCGCCGAACCCATTGCGG 1557 ||||||||||||||||||| | || |||||||||||||||||||||||||| |||||| Sbjct 1489 GTACAATAACATGACTTTCTTACTACCTGATGGTTATGCCTACCGCCGAACCTGTTGCGG 1548 Query 1558 TGTACCCTCTGGTCTGTACAATACTCAATACCTTGATTCTTTTGGTAATCTATTTTTAAT 1617 |||||||||||| || ||||| || |||||||||||||||||||| |||||||| |||| Sbjct 1549 TGTACCCTCTGGACTATACAACACACAATACCTTGATTCTTTTGGCAATCTATTCCTAAT 1608 Query 1618 AATAGATGCCATGCTTGAATTCGGTTTCAGTGAATCTGAAATCGACAATTTTATCCTCCT 1677 ||||| |||||| |||||||||| ||| ||| || |||||||| |||||||||||||| Sbjct 1609 CATAGACGCCATGATTGAATTCGGATTCCTTGATTCCGAAATCGAGAATTTTATCCTCCT 1668 Query 1678 TGTATTAGGAGATGATAATACTGGTATGACGGTCATATCAATTGACCGAATCTATGATTT 1737 || |||||||||||||| |||||||||||| || | || || || | |||||| Sbjct 1669 AGTTTTAGGAGATGATAACACTGGTATGACGACTATCCCTATATGTCGTATGTTTGATTT 1728 Query 1738 CATCAATTTTCTTGAAAAATACGCTTTAATACGTTACAACATGGTCCTATCCCCGACCAA 1797 ||||| ||||||||||||||| || | ||| || ||||||||||| || ||||||| Sbjct 1729 CATCACTTTTCTTGAAAAATATGCCCTTCAACGGTATAACATGGTCCTTTCTGCGACCAA 1788 Query 1798 ATCTGTTTTAACTACATTGCGCTCTAAGATCGAGACCCTCGGTTACCAATGTAACCATGG 1857 ||| ||| |||| ||||| ||||| || || ||| | || |||||| ||||||||||| Sbjct 1789 ATCCGTTCTAACGACATTACGCTCAAAAATTGAGTCTCTAGGTTACGCCTGTAACCATGG 1848 Query 1858 ATCCCCTAAGCGCGATATTTCCAAGCTCGTTGCCCAACTCTGTTATCCAGAGAATGGCCT 1917 ||| || ||||| ||||| || || ||||||||||||||||| |||||||||||| | Sbjct 1849 ATCTCCCAAGCGTGATATCGATAAACTTGTTGCCCAACTCTGTTACCCAGAGAATGGCTT 1908 Query 1918 TAAGCCACATACTATGGCTGCTAGAGCAATCGGAATTGCGTACGCCGCTGCTGGCCAAGA 1977 |||||||| || |||||||| |||||||| || ||||| || ||| | ||||||||||| Sbjct 1909 AAAGCCACACACCATGGCTGCCAGAGCAATAGGTATTGCATATGCCTCCGCTGGCCAAGA 1968 Query 1978 TCCAATGTTTCACTCATTTTGCCATGATGTGTATAACTTGTTTAGGT-TAGATTATAAAC 2036 | | |||||||| |||||||| ||||| || || | ||||||| ||| |||| | Sbjct 1969 TGTTGTATTTCACTCCTTTTGCCAGGATGTATACAATATATTTAGGTCTAG-TTATCGCC 2027 Query 2037 CTGATGCTCGCACTAACTTGAATTTCCAACGCCAAATTTATCACAATCTTGAAGATGGAA 2096 |||| | |||||||| | ||||||||| || | | |||||| ||||||||||||| Sbjct 2028 CTGACGACCGCACTAATCTCTTTTTCCAACGACAGTTGTTTCACAACCTTGAAGATGGAA 2087 Query 2097 TTCCTGATCTTGCAACACCAGTTGTGCCACCATTCCCTTCATTATATGAAGTACGCCATA 2156 | || |||||||| | ||| ||||||| || || |||||| | |||||| | | | Sbjct 2088 TCCCCGATCTTGCGCCGCCAATTGTGCCCCCGTTTCCTTCACTCTATGAAATCCAGGACG 2147 Query 2157 TGTACTCCAAGTACCAAGGCCCACTGTCGTATGCTCCAAAATGGAACTACGCTCACTTCA 2216 ||||| | |||| ||| || ||| |||||||| ||||||||||| |||| |||| Sbjct 2148 CCTACTCGTATTACCGAGGTCCTCTGGAATATGCTCCTAAATGGAACTATTCTCATTTCA 2207 Query 2217 TCAATGACCCGGATGTTACGCCACCCTCTCCCAAAACTATGCGTGACTACGAAATTGAGA 2276 | |||| || ||| || |||||| ||||| |||||| | | || ||| |||| Sbjct 2208 TTCATGATCCAGATTCGACACCACCCCACCCCAAGACTATGAGCGCTTATGAAGTTGAAC 2267 Query 2277 ACGATCTCATATCTCGTACTGCACCTACTTTTGAAACGGTTGTGCCCGCCACAAGAAATT 2336 | || | | |||| ||| ||||||||||||||||| |||||| ||| ||||||| Sbjct 2268 ATAATATGTCAACTCGCGTTGCTCCTACTTTTGAAACGGTCGTGCCCAGCACTAGAAATT 2327 Query 2337 TCCCGTGATTATTTTGTGC--TTTACAAGCATAGAA--ATTTTTCTCGCTAA 2384 | ||||||||||||||||| |||| |||||| || | ||| || ||||| Sbjct 2328 TGCCGTGATTATTTTGTGCTTTTTAGAAGCATCTAAGTACTTTACTTGCTAA 2379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7661117979224