Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021097.1 Length=2353 Score E Sequences producing significant alignments: (Bits) Value seq62812 477 1e-131 >seq62812 Length=2273 Score = 477 bits (528), Expect = 1e-131 Identities = 1273/1932 (66%), Gaps = 81/1932 (4%) Strand=Plus/Minus Query 373 TACTATATGACTGTCGTCTATGGCTACTTCTTGCTCAATGATCTACACACTCGTCCTACC 432 ||| ||||| || ||||||||||| ||| | | |||||||| |||| || | | | Sbjct 1900 TACCATATGTCTACTGTCTATGGCTATTTCCTCTTGAATGATCTTCACATCCGCCTTGCT 1841 Query 433 CGGTCTGTTCATGCCCGTGTTTGGGTTGAATCATCCTGGAGATCTGATTTTGTTAAGTTC 492 | |||| ||| ||||| |||| |||| || |||| | |||||| | | | ||| Sbjct 1840 CCTTCTGCTCACGCCCGCTCCTGGGCTGAAGTCTCATGGAAAATTGATTTCGCTGAATTC 1781 Query 493 CTGACTACCCTTCCTGTCCCTGAATTTCTCAAGCCAATCTTGTCCCAATTTCATCCATTT 552 ||| || || || |||||||| || ||||| | ||||||| ||| | ||| Sbjct 1780 CTGCTCGGTCTCCCCGTTCCTGAATTCCTTGTTCCAATTCTATCCCAATATCAGCACTTT 1721 Query 553 AACACAGACAGAACTAAAAATGTGTTCTTTAGCCCCTCTGCTGCTGGATTTGATCATGAC 612 | ||| || ||||| || || ||| |||| || ||||||||||| ||||| |||||| Sbjct 1720 ATCACTGATAGAACCAAGAACGTGCATTTTACACCTTCTGCTGCTGGTTTTGACCATGAC 1661 Query 613 CAATTCTTTGGCCGTATCTTTCCTATGAATATGTTTGCTGCATTCCACGATTGTACTGCT 672 ||||||||||| || | |||||| |||| ||||||||||| |||| ||||| |||| Sbjct 1660 CAATTCTTTGGACGCGTTTTTCCTTTGAAAATGTTTGCTGCCCTCCATGATTGCGTTGCT 1601 Query 673 ACACTCCCTGGTAA--CTCCTCCAAAGTTGATGTCCTTCGTAATTTATACACCNNNNNNN 730 || || ||| |||| || ||| | | | || | | ||| | || | Sbjct 1600 ACTCTACCTAGTAATGCTACTC--TGGCTCAAGTTTTACAGAATGTTTATAGTCGTGATC 1543 Query 731 NNNNNNNNATAACTGCTCCTGGTTATACTTGTATGATTCCTGATTTGATTGGAATTACTC 790 || |||| ||| | | | ||| ||||||||| | ||| | |||| | Sbjct 1542 TCTACACGATTACTGAACCTCGCTTCTCGTGTTATATTCCTGATCT-ATTAGGATTAACC 1484 Query 791 CCGATCAAGCCGCTGC------CACTACTGTTAACTATATGAATTCTAAGTTTTATCAAA 844 | || | || | ||| ||| ||| | || ||| | || |||||| | ||||| | Sbjct 1483 CTGACC--GCTGGTGCTAATGTCACCACTTTGAATTATGTCAACTCTAAGATCTATCAGA 1426 Query 845 CTTTCACTTCTATCTTTAATCCTGTCCTTTTCCGCGACTCCCAGCGTCGAGCTTCACTTG 904 | | | | || || ||||||||||| |||||||| ||| ||||| ||||||||| Sbjct 1425 TCTACTCAACAATATTCAATCCTGTCCTGTTCCGCGATCTCCAACGTCGCTCTTCACTTG 1366 Query 905 CTGCTCTCTCATTCACTGCTCCCACTTATCCGACTAACCATATCAATGCTTATGATTACA 964 |||| |||||||||| | ||||| || |||||| | || ||||||||||||||| Sbjct 1365 CTGCACTCTCATTCAAATCACCCACCTACCCGACTGCCAATGTCAATGCTTATGATTTAC 1306 Query 965 TGTTCTCCGCTACAGCCCCTAACCTACGCGAACTTCGAATTGTGTTACAATCAATC-ATT 1023 |||||||||| || | | ||| | || ||||| | |||| | || |||||| | | Sbjct 1305 TGTTCTCCGCAACTCCTGCCAACATTCGTGAACTGAAAGTTGTCCTCCAGTCAATCTACT 1246 Query 1024 GCTATTACCAAAGATGTTTTCAAATCTGATCAAACGCTTGGTAATTATGTTGCTGATTAC 1083 | | | | || ||| ||| | | || || ||| || | | | || |||| || Sbjct 1245 CCCAGTTTGATGGAAAGATTC-AATGTAAACAGACTCTTAGTCAGTTTATTACTGA-AAC 1188 Query 1084 T-CCTCCGGCTCCATAATCCATCATGGTTACTCCACTTATGCTCTTCCAACTTGGTCACA 1142 | ||| || |||| | | || | ||||| || | || || ||||||||| || Sbjct 1187 TGTCTCTCCTTCAATAACCAAGCACTGCTACTCTACCTTCGCGCTCCCAACTTGGAGCCA 1128 Query 1143 TACTCCTACTACTGGAAAATTTGACCGATTTAATACTGCTAACA---CCTTCAATTTAGT 1199 |||| | || || | | ||| | | |||| | || || | | | ||| Sbjct 1127 TACTGAATCCGATGCTAAGCTGGCCCGCT---ACTCTGCGACCACTGCCATTATTCAAGT 1071 Query 1200 TACTGAAGATGCTAGAGCTGAAGATATCTGTTTCCTTCAACGCCCTGCTGCTGAGATCCC 1259 | | ||||| | |||||| |||| | || || || ||||||||||||| | || || Sbjct 1070 TTCCGAAGAAGAAAGAGCTCAAGACTTTTGCTTTCTCCAACGCCCTGCTGAAGCTATACC 1011 Query 1260 TCATACCCGCCTCATCACTGACATAGTTTATGCNNNNNNNNNNNNNNNNNNNNNNTCCTT 1319 ||| || | | ||| | ||||||| | | Sbjct 1010 CCATGCCAATGAAGTTAATGATGTTATTTATGCTACTGCCGCCGAACCCAACACTGCTGT 951 Query 1320 GACTGTACCTGCTAACCATGCTCTCTACCGCCGTTGGCCTTACTGCCTCCGCCTTGATGA 1379 || | |||||||| |||| || ||||||| || | ||||||| || | Sbjct 950 TGCTCTGCCTGCTAATCATGTCATCACTCGCCGTTTTCCCTTTGCCCTCCGC--TGCCAA 893 Query 1380 A--GATGCTGCTAATGGCTTCCCTCGCCATGATAATGAAGATCTTGTTGCTTTCTCTGCT 1437 | | || || ||||| || || | ||||||||| || ||||| ||| || | Sbjct 892 ACCGCTGTTGAGAATGGATTTCCCCACCATGATAACGATGATCTCGTTCAATT------T 839 Query 1438 GAAAGCCATG------CTGCTCCACGCGTTCTTGTCCTCGATACTCCTGGTGATACCGTG 1491 ||| ||||| | ||||| |||||| | |||||||||| |||||||| | Sbjct 838 GAAGACCATGTGCATTCCGCTCCTCGCGTTTTACTCCTCGATACAACTGGTGATGGTATT 779 Query 1492 ACTAGTGCCCACCTTCCTACTCTTACAGGTAAGGTAATTGAGTCTTTTGAACTCGATGGC 1551 | || | | |||||| | ||| | | || || ||||||| || || ||||||||||| Sbjct 778 ATTAATCCTCACCTTACCACTGCTGCTGGCAAAATAATTGAATCCTTCGAACTCGATGGA 719 Query 1552 TCTACTATTGAAATGCCCGATGCTAGAAAGTCCCTTGGCATGCAAAACTGCATGTTTGCC 1611 || || |||||||||||| || | ||| | | ||||||||||||||||||||||| Sbjct 718 TCAACAATTGAAATGCCCAATATCAATAAGCCTTTAGGCATGCAAAACTGCATGTTTGCT 659 Query 1612 GACTCTGCCATCGCTTACAAATATGTCCGTCCCGGATC---TTACTGGCGCCCTCGTGCT 1668 |||||||| || || ||||| ||||||||||| || || |||| | | || | ||| Sbjct 658 GACTCTGCTATTGCATACAAGTATGTCCGTCCTGGCTCCTTTTACAGACCCCGTGACGCT 599 Query 1669 GCTGGTGGAACTCTCCCACCGTTGAATCGTGCCCCTCCAAACTCTCGTCCTCGTTTGCCA 1728 || || || || || | ||||| | |||| | || | || || | || Sbjct 598 GCCTCTG---TCCTGCCGCCCCTCAATCGAGTAACTCCTGATCCTAGGCCCCGCCTACCC 542 Query 1729 GCCTCCTCACTGCTACATGATAGAACTAAAGTTTTTCTTCCCCAGTTAAACCGACACG-- 1786 |||||||| |||| ||||| |||| || || | || || | | ||| || || Sbjct 541 GCCTCCTCTTTGCTCCATGACCGAACAAAGGTATACCTACCTTTGATTAAC--ACTCGGA 484 Query 1787 TTAATGCCGTTCCTGATAATGA-TGCCCTTCCTGGTTTCAC--TCAGATTACTCCTGTTA 1843 | |||| || | |||| | ||||||||||| | || ||||| | ||||| Sbjct 483 TCAATGAACAGCC-CAACATGACTACCCTTCCTGGTATGACTGTCAGA--AACAATGTTA 427 Query 1844 ATGTCATTCGCTATATCCAGTCTTTTCTTGGATTTCGCACTGTTGATAGTTCTGCCAATG 1903 | | | || |||| || || ||| |||||||| |||||||| || || |||||| Sbjct 426 ACGCTCTGCGTTATACTCAATCCTTTATTGGATTTAAGACTGTTGACAGCTCATCCAATG 367 Query 1904 AAGCTGCCCTTGATGCTGTCCCTGGAATGAATGAAAGCTTGCTGATGATCTGGTCCCCAT 1963 ||| ||||| |||||||||| |||| | || | |||||| | ||||| |||| Sbjct 366 CTGCTAATCTTGACGCTGTCCCTGCAATGGAAGAGAATAATCTGATGGTTTGGTCACCAT 307 Query 1964 ATACCTACAACCCATATGAGTCTGATGATTATCCTGCTC--TTGCTTATGATGC---CTC 2018 |||| |||| || ||||| || || |||| | | | ||| | | | ||| Sbjct 306 ATACATACACTCCGTATGA---AGACGA--CTCCTTCCCAGTCGCTGACCTTTCCAACTC 252 Query 2019 TAGGCATTATTACTTGACCAACCTCCGTACCATCTTTGGTACTGATTACAATTTGGTTGC 2078 || || || || |||||||||| |||||||||||||||||||||| || || ||| Sbjct 251 CAGACACTACTATCTGACCAACCTGCGTACCATCTTTGGTACTGATTGTAACCTGATTGA 192 Query 2079 CACCAAGCACATTTATGAGTCCTTCCCCGCTGTTTAAGCAATTACTCTCTTTTCCTTTTA 2138 | ||| ||||| |||| ||||| | ||||| ||| ||| |||| ||| Sbjct 191 AGTGATCCACCCCTATGAATCCTACCCCGTCGCCTAAGCGATTTCTCAATTTTATCTTT- 133 Query 2139 ATTAAGTTAAAAGTCTTTGATGTTTAATTGGTTCCCTTT--CCAGCAATCACGTCTATGC 2196 | || ||||| || |||||||| |||| ||||| ||||||||| ||||| Sbjct 132 ----ATTTTAAAGTTTT---TGTTTAATCGGTTTCCTTTTGTTGACAATCACGTGTATGC 80 Query 2197 TACGNGgttcttttgtttcgttttttattcctgaacttttatgtttaatgtttttcaacg 2256 |||| | ||||||||||||| |||||| | ||||||| |||| ||||||| | || Sbjct 79 TACGTGATTCTTTTGTTTCG---TTTATTTCCGAACTTTCCTGTT---TGTTTTTTATCG 26 Query 2257 ttgttttcTATT 2268 || |||||| || Sbjct 25 TTATTTTCTTTT 14 Score = 109 bits (120), Expect = 8e-21 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 1 AGATTTTTCTTAAGCGCCCCGCCTCAAGAAATTAAGAATTCACATTCGTCTAAATTATCA 60 ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| Sbjct 2272 AGATTTTTCTTAAGCGCCCCGACTTTTGAAATTAAGAATTCACATTCGTCTACGTTATCA 2213 Query 61 AGTT-CTCACACAACCTCTGCTCTAATAATTAAGATGTCTAC 101 ||| |||| | | || ||||||||| ||||||||||||| Sbjct 2212 AGTCACTCAAAGACCC-CTGCTCTAACCTTTAAGATGTCTAC 2172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7414913436486