Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021098.1 Length=2431 Score E Sequences producing significant alignments: (Bits) Value seq62892 1590 0.0 >seq62892 Length=2478 Score = 1590 bits (1762), Expect = 0.0 Identities = 1778/2360 (75%), Gaps = 22/2360 (1%) Strand=Plus/Plus Query 14 GCGGCCCCCGCCTATAATATTTAGAATTCACATTCGTCTAATTTTTCCCCTTCACAAATA 73 ||||||||| | || ||||||||||||||||||||||||| | | || | || || Sbjct 1 GCGGCCCCCCCTTA-AATATTTAGAATTCACATTCGTCTATTAACATACTTTGAAAATTA 59 Query 74 ACTGCTAACCCCTTTTATTTTAACT-AACGTCTCACAATGCCGTTCAACTCAGTTCGTAA 132 ||| |||| | | || ||| | |||||||||| ||||||||||||||||| || || Sbjct 60 ACT--TAACAATTAGTTTTCTAATTTAACGTCTCACCATGCCGTTCAACTCAGTCCGCAA 117 Query 133 TTATCTCGAAGAACGCTCCGTTCGTGTTAAGAAAGAAATGATGACATATCAGTCATCAAA 192 ||| || ||||||| || | |||| ||| | | ||| || ||||| || Sbjct 118 TTACCTTAGCGAACGCTTGACCCGCCTGAAGATTGAATTTAAGACTTACCAGTCTAACAA 177 Query 193 CCGTGACCCCGATGCAATTCTTGAGCAATCTCAAGACCCGGACTATCGTCGTTATTATGA 252 | ||| || ||| |||||||||||| ||||||| || |||||||||||||| || || Sbjct 178 TCATGATCCTGATAAGATTCTTGAGCAAACTCAAGATCCCGACTATCGTCGTTACTACGA 237 Query 253 CAATGCCCGATATAATCCTTCAAATGATTTGAAGTATCGTATGCTATCAAAGGAATACTC 312 |||||| || |||||| | ||||| ||| | | |||||| |||||||| || Sbjct 238 CAATGCTCGTTATAATAATGATAATGAAAAGAAACACCTTATGCTTAATAAGGAATATTC 297 Query 313 TACTCTAGTTGAAGCTTACCGTCTCAGA-AATGATGACAAACACCAACCGTATGAACTTC 371 |||||| || |||||||| || | | || |||| ||| | |||| |||||||||| | Sbjct 298 TACTCTTGTCGAAGCTTATCG-CACTGACAATGCCTCCAAGCGCCAAACGTATGAACTAC 356 Query 372 ATCAGCCAGTCCCACAAGATGCTGCTCCCGTTCCTTCCTACCGTGCCCCTGCTCCTGGAA 431 | ||||| ||||| || ||||| || || | | ||| || || ||||||| Sbjct 357 ACCAGCCTGTCCCTTCCGACGCTGCCCCAATTGTTCAAAATCGTATTCCCGCACCTGGAA 416 Query 432 TAAAACCCGTTCCCCTCATGTACCACTATGGACATGTTATTCACGATCCTGTCTCTCTCA 491 | || | || |||||||||||||| ||||| ||||||| || ||||| ||| |||| Sbjct 417 TCAAGCTAGTCCCCCTCATGTACCATTATGGTCATGTTACTCGTGATCCCA-CTC-CTCA 474 Query 492 CC--GAATCAGCAA---TTGATGATGATTCCGATACCCTTCCTGACTCCGATGAGCCCAC 546 | ||| || | |||||||| | ||| | || | |||| | ||| ||| Sbjct 475 GCCTGAACAAGATACCTTTGATGATTCTGCCGTT---CTACTTGACCCACATGTACCCGT 531 Query 547 TGTTACTCACTTTGGATACCCAATCAATAAGCGTATTTACGATTTAATTTGTAATCGCTA 606 | || ||| |||| |||||| || | | || || | | || ||| | || Sbjct 532 TTCAACAAACTACGGATTCCCAATTGATGATCAAATCTATCAACTTATCTGTTTCAGATA 591 Query 607 TCCTGAATACCTAAGTGTAATTAGTGCTTATTGTCGTCCTATTGGAACAGTTGATGCTAC 666 ||| |||| || | ||| || | | || ||||| || ||| || ||||||||||| Sbjct 592 CCCTCAATATCTGAATGTTATAAACTCGTACTGTCGACCCTCTGGTACTGTTGATGCTAC 651 Query 667 ATTTAAGGATTTTAATAAGGAACAGATCCCATCTGGACCTATTGATCCCAATCGTAAAGA 726 |||| ||||||||||| |||||||||||||||| |||||||| | | | ||||| Sbjct 652 ATTTTCTGATTTTAATAAAGAACAGATCCCATCTGCCCCTATTGACTACTACAGAAAAGA 711 Query 727 AGAAGTGCTAACCCACATCTTTCGATTCTTAGATGCTCAGCCTTACCTGCCCCTTCATTT 786 |||| || ||| || | ||| | ||||| | |||||||| ||||||||||| Sbjct 712 CCAAGTCCTTGTCCATATACTCAAGTTCCTTGATGCCAAACCTTACCTACCCCTTCATTT 771 Query 787 CGTTGATACCCAGTTTTGCAAAACACCACTTGTAACTGGAACAGGCTACCACAACCGCTA 846 |||||||||||||| |||||| || || |||||||||||||| |||||||| || ||||| Sbjct 772 CGTTGATACCCAGTATTGCAAGACTCCTCTTGTAACTGGAACCGGCTACCATAATCGCTA 831 Query 847 TTCTTTCAAACAGAAAGCGCACGCTAAGTACTCTCATCCTGAGGAATACGCTCAAATGCC 906 |||||| |||||||||||||| |||||||| ||||| ||| | || || | || Sbjct 832 TTCTTTTAAACAGAAAGCGCATGCTAAGTATTCTCACCCTCCCCAGTATGCAACTAAACC 891 Query 907 AACCTCAAAAGGCTATTTCTACAATGCCACTTATGAGAATGCTCGCACTCTTGTTCATTA 966 |||||| ||||| ||||| || ||||| ||||| |||||||| ||||| | |||||| Sbjct 892 AACCTCCAAAGGTTATTTTTATAATGCTACTTACGAGAATGCCCGCACATTAATTCATTT 951 Query 967 TATTAAGGAGTATGGATTACCTTTTAATATCCATTACACTCCTGAAGATGTTGACTTCAC 1026 |||||| | | |||||||| |||||| | | | |||||| | ||| |||| Sbjct 952 GATTAAGAAACACGGATTACCATTTAATCCCGTTGTTGCACCTGAAACTTCTGATCTCAC 1011 Query 1027 AGAAGAACAGATTCAAGCCTATATTGACTCTGCCAACAACTTCTTTAATGACTACCCGAC 1086 || | ||||| | | ||||||||||| |||| ||||| ||||| |||||||| Sbjct 1012 TGACTCTGACATTCAGTCTTTCATTGACTCTGCAAACAGTTTCTTCAATGATTACCCGAC 1071 Query 1087 GTTATTGTTCACCCGCAACCACATCTCTAAACGAGATGGAACTCTTAAAGTTCGTCCCGT 1146 |||| ||||||| ||||||||||| || ||||| ||||||| ||||||||| || ||||| Sbjct 1072 GTTACTGTTCACTCGCAACCACATTTCGAAACGTGATGGAATTCTTAAAGTCCGCCCCGT 1131 Query 1147 TTATGCTGTTGATGACTTGTTTATTATAATCGAGTTGATGTTGACTTTCCCCCTCACCGT 1206 ||| || ||||||||| | ||||| || ||||| | ||| | || ||||| | || || Sbjct 1132 TTACGCAGTTGATGACATTTTTATAATCATCGAACTCATGCTTACATTCCCTTTGACTGT 1191 Query 1207 CCAAGCTCGAAAACAGTCTTGTTGCATTATGTATGGACTTGAAACCATTCGTGGTTCCAA 1266 ||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct 1192 TCAAGCTCGAAAACCCTCCTGTTGCATAATGTATGGACTCGAAACTATTCGAGGTTCAAA 1251 Query 1267 CCATTACATTGAACGCCTAGCTCGTTCGTATTCGACCTACTTCTCCCTTGACTGGTCCAG 1326 ||||||||||||| |||||||| |||||||||| ||| || | || |||||||| Sbjct 1252 TCATTACATTGAACAAATAGCTCGTGACTATTCGACCTTCTTTTCTTTAGATTGGTCCAG 1311 Query 1327 TTATGACCAACGACTCCCTCGCGTCATTACTGATATTTATTACACTGACTTCCTCCGAAG 1386 |||||| ||||| ||||| |||||||| ||||||||||||||||||||||| ||||| || Sbjct 1312 TTATGATCAACGCCTCCCGCGCGTCATCACTGATATTTATTACACTGACTTTCTCCGCAG 1371 Query 1387 ACTCATAGTAATTAACGATGGATACCAACCGACCTATGAATACCCAACCTACCCTGACCT 1446 || ||||| || ||| |||||||||||||||||||||||||||| || ||||||||||| Sbjct 1372 TCTTATAGTGATAAACCATGGATACCAACCGACCTATGAATACCCCACTTACCCTGACCT 1431 Query 1447 TGATGAACACAAAATGTACACAAGAATGGATAATTTACTTACCTTTCTCCATACCTGGTA 1506 |||||||||||| |||| |||||||||||| |||| |||||||| || ||||| Sbjct 1432 TGATGAACACAAGTTGTATGATAGAATGGATAATCTACTCTATTTTCTCCACACTTGGTA 1491 Query 1507 CAACAACATGACCTTCGTTTTAGCTGATGGTTATGCCTACCGCAGAACTTATTGCGGCGT 1566 ||| |||||||| ||| | || |||||||||||||||||||| |||| | |||||| || Sbjct 1492 CAATAACATGACTTTCTTACTACCTGATGGTTATGCCTACCGCCGAACCTGTTGCGGTGT 1551 Query 1567 ACCCTCTGGTCTGTACAACACTCAATACCTCGATTCTTTTGGTAATCTATTTCTAATTAT 1626 ||||||||| || |||||||| |||||||| ||||||||||| |||||||| ||||| || Sbjct 1552 ACCCTCTGGACTATACAACACACAATACCTTGATTCTTTTGGCAATCTATTCCTAATCAT 1611 Query 1627 AGATGCTATGATCGAATTCGGTTTC--AGAACCCCTGAGATCGATGATTTCATTCTCCTT 1684 ||| || ||||| |||||||| ||| || || || ||||| |||| || ||||| Sbjct 1612 AGACGCCATGATTGAATTCGGATTCCTTGATTCC--GAAATCGAGAATTTTATCCTCCTA 1669 Query 1685 GTCCTTGGAGATGATAATACTGGTATGACGGTCATTTCAATTGACCGAATCTATGACTTC 1744 || | ||||||||||| |||||||||||| || | || || || | ||| ||| Sbjct 1670 GTTTTAGGAGATGATAACACTGGTATGACGACTATCCCTATATGTCGTATGTTTGATTTC 1729 Query 1745 ATCACCTTTCTTGAAATTTACGCGCTAACCCGATATAATATGGTCCTTTCAACGACCAAA 1804 ||||| |||||||||| || || || || ||||| ||||||||||| |||||||| Sbjct 1730 ATCACTTTTCTTGAAAAATATGCCCTTCAACGGTATAACATGGTCCTTTCTGCGACCAAA 1789 Query 1805 TCCGTGTTAACAACGTTACGCTCTAAAATTGAGACTCTCGGTTACCAATGTAACCACGGT 1864 ||||| |||| || |||||||| ||||||||| |||| |||||| |||||||| || Sbjct 1790 TCCGTTCTAACGACATTACGCTCAAAAATTGAGTCTCTAGGTTACGCCTGTAACCATGGA 1849 Query 1865 TCTCCTAAGCGTGATATTTCCAAGCTCATTGCCCAGCTCTGTTACCCAGAGAATGGACTA 1924 ||||| ||||||||||| || || ||||||| |||||||||||||||||||| || Sbjct 1850 TCTCCCAAGCGTGATATCGATAAACTTGTTGCCCAACTCTGTTACCCAGAGAATGGCTTA 1909 Query 1925 AAGCCACATACTATGGCTTCAAGAGCAATTGGAATTGCGTATGCCTCTGCTGGCCAAGAC 1984 |||||||| || |||||| | |||||||| || ||||| |||||||| ||||||||||| Sbjct 1910 AAGCCACACACCATGGCTGCCAGAGCAATAGGTATTGCATATGCCTCCGCTGGCCAAGAT 1969 Query 1985 TACATGTTTCACTCTTTTTGTCAAGATGTGTATAATATGTTTAGGT-TAGACTATAAACC 2043 | |||||||| ||||| || ||||| || ||||| ||||||| ||| ||| || Sbjct 1970 GTTGTATTTCACTCCTTTTGCCAGGATGTATACAATATATTTAGGTCTAG-TTATCGCCC 2028 Query 2044 TGATGCTCGCACCACTCTGAATTTTCAACGTCAAATTTATCATAATTTAGATGATGGAAT 2103 ||| | ||||| | ||| ||| ||||| || | | ||| || | || |||||||| Sbjct 2029 TGACGACCGCACTAATCTCTTTTTCCAACGACAGTTGTTTCACAACCTTGAAGATGGAAT 2088 Query 2104 ACCAGATCTTGCAACACCAGTCGTGCCACCATTCCCTTCGATTTTTGAAGTTCGTGAAAT 2163 || |||||||| | ||| | ||||| || || ||||| | | |||| | | || Sbjct 2089 CCCCGATCTTGCGCCGCCAATTGTGCCCCCGTTTCCTTCACTCTATGAAATCCAGGACGC 2148 Query 2164 GTACTCCCGTTACCAAGGTCCACTGACCTATGCTCCTAAATGGAATTTCGCTCACTTTAT 2223 ||||| ||||| |||||| ||| ||||||||||||||||| | |||| || || Sbjct 2149 CTACTCGTATTACCGAGGTCCTCTGGAATATGCTCCTAAATGGAACTATTCTCATTTCAT 2208 Query 2224 CAATTCCCCGGACGTGACACCCGCCCACTACAAAACTATGCGCATGTATGAAATTGAAAA 2283 || || || |||||| ||||| ||| |||||| || |||||| ||||| | Sbjct 2209 TCATGATCCAGATTCGACACCACCCCACCCCAAGACTATGAGCGCTTATGAAGTTGAACA 2268 Query 2284 TAACATTACAATTCGACCTGCCCCTACTTTTGAAACGGTCGTGCCCACCACAAGAAATTT 2343 ||| || ||| ||| ||| ||||||||||||||||||||||||| ||| |||||||| Sbjct 2269 TAATATGTCAACTCGCGTTGCTCCTACTTTTGAAACGGTCGTGCCCAGCACTAGAAATTT 2328 Query 2344 CCCGTGAtttttttGTGCTT 2363 |||||||| |||||||||| Sbjct 2329 GCCGTGATTATTTTGTGCTT 2348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7664315440818