Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021099.1 Length=2349 Score E Sequences producing significant alignments: (Bits) Value seq62812 645 0.0 >seq62812 Length=2273 Score = 645 bits (714), Expect = 0.0 Identities = 1560/2312 (67%), Gaps = 95/2312 (4%) Strand=Plus/Minus Query 1 AGATTTTTCTAAAGCGGCCCCGCTA--GAAATTAAGAATTCACATTCGTCTACATTATCA 58 |||||||||| ||||| ||| || |||||||||||||||||||||||||| |||||| Sbjct 2272 AGATTTTTCTTAAGCGCCCCGACTTTTGAAATTAAGAATTCACATTCGTCTACGTTATCA 2213 Query 59 AGTTTTCCTGA-ACCTCTGCTCTAATCCTTAAGATGTCTAC-TGAAGA---AACTGCTCC 113 ||| | | ||| ||||||||| | ||||||||||||| | || | ||| || | Sbjct 2212 AGTCACTCAAAGACCCCTGCTCTAACCTTTAAGATGTCTACCTCAACATCTAAC-GCCC- 2155 Query 114 TCAGACTAAGGCAA-TCAAGAACCAAAATGTTGT-CCTCTCC-----TTTGA-AGA--TG 163 |||| | || | |||||| || ||||| || |||| | || || || Sbjct 2154 ---GACTTAACAAACTTAAGAAC---AAGGTTGTTCCACTCCCATTCTCTGCTAGTACTG 2101 Query 164 GAAAACCACCTGGTCCCGTCTCTGACTTCATGTCTTTGTTCCGCTCAAACTCTTGTGCAC 223 | ||| | | || |||| ||| | ||| || || || || | ||| | Sbjct 2100 TCGATGAACCCGCCCACG-CTCTC-CTTGA-GTCAATG---CGACTTAATTCATCTGCCC 2047 Query 224 ACACTGATACTGCTAATCAATGGATCATTGATGTTTTCCCTAACATGACTCCCATTC--- 280 |||||| | |||||| ||||||| ||||| | ||||| || ||| ||||| || Sbjct 2046 ACACTGCTGTTGCTAACCAATGGACTATTGACCTCTTCCCAAATATGG-TCCCAGTCCTT 1988 Query 281 --TCATGTACGTCATGACCAAAGCCCAACACCATTCTGAAGCTACTGACTATCGTCTCCA 338 ||||||| ||| |||| |||||| |||| || | | | |||| || Sbjct 1987 ACTCATGTA----ATGGTTGCTGCCCCGCACCATGCTGATGCCGTTAATTTTCGTGAACA 1932 Query 339 CTCCAAGTCATCTGTCTTC-ACCATCTGTATGTACTACATGTCCATCATTTATGGCTACT 397 ||| || |||| || | || || | | ||| | ||||| | | |||||||| | Sbjct 1931 CTCGAAAATCTCTG-CTGCGACAATGATTTTATACCATATGTCTACTGTCTATGGCTATT 1873 Query 398 TCTTGTTGAATGATTTACATTCCCGCCCCACTCAATCTGCCCATGCTCGCAACTGGGTTG 457 || | ||||||||| | || ||||| ||| ||||| || || ||| ||||| || Sbjct 1872 TCCTCTTGAATGATCTTCACATCCGCCTTGCTCCTTCTGCTCACGCCCGCTCCTGGGCTG 1813 Query 458 AGAACTCTTGGAAATCCTCCTTTGCTAAGTTCCTTATGACACTTCCCGTGCCTGAATTTC 517 | ||| |||||| || ||| | ||||| | || ||||| |||||||| | Sbjct 1812 AAGTCTCATGGAAAATTGATTTCGCTGAATTCCTGCTCGGTCTCCCCGTTCCTGAATTCC 1753 Query 518 TGCTTCCCATCCTTGCTCAGTTCCACCCATTCAATACCGACAGGACTAAGAATGTTTTCT 577 | |||| || || | || | || | || | || || || || ||||| || | Sbjct 1752 TTGTTCCAATTCTATCCCAATATCAGCACTTTATCACTGATAGAACCAAGAACGTGCATT 1693 Query 578 TTAGTCCCTCCGCTGCTGGATTTGACCATGACCAATTCTTTGGCCGTGTCTATCCTTTGA 637 ||| || || |||||||| ||||||||||||||||||||||| || || | |||||||| Sbjct 1692 TTACACCTTCTGCTGCTGGTTTTGACCATGACCAATTCTTTGGACGCGTTTTTCCTTTGA 1633 Query 638 ACATGTTTGCTGTAATCCATGACTGCACTGCTACCCTCCCTGGTAATTCTACCAGAACCC 697 | |||||||||| ||||||| ||| |||||| || ||| ||||| |||| | | Sbjct 1632 AAATGTTTGCTGCCCTCCATGATTGCGTTGCTACTCTACCTAGTAATGCTACTCTGGCTC 1573 Query 698 AAGTCCTACAAGACCTTTTCTCAAAG-GTCCTATACACTGTTAACGCCCCTGGTTTCACT 756 |||| |||| || ||| | | | || ||||| ||| | ||| | ||| | Sbjct 1572 AAGTTTTACA-GAATGTTTATAGTCGTGATCTCTACACGATTACTGAACCTCGCTTCTCG 1514 Query 757 TGTCTGATTCCTGATCTATTTGGTCTTACCCT---CGATCAAACAGTTAACACCACTGTT 813 ||| |||||||||||||| || | ||||| || | | | ||||||| | Sbjct 1513 TGTTATATTCCTGATCTATTAGGATTAACCCTGACCGCTGGTGCTAATGTCACCACTTTG 1454 Query 814 AATTACATGAATTCCAGACTTTACCAAGTCTTTTCATCACTGTTTAATCCCGTGTTATTC 873 ||||| | || || | | || || ||| ||| || | || ||||| || | ||| Sbjct 1453 AATTATGTCAACTCTAAGATCTATCAGATCTACTCAACAATATTCAATCCTGTCCTGTTC 1394 Query 874 CGCGACTCTC-AGCGCCGCTCATCCCTTGCTGCACTCTCTTTCACCCCGCCTACATATAC 932 ||||| |||| | || ||||| || |||||||||||||| |||| | || || || | Sbjct 1393 CGCGA-TCTCCAACGTCGCTCTTCACTTGCTGCACTCTCATTCAAATCACCCACCTACCC 1335 Query 933 AACCAATCATATTAATGCATATGACTACATGTTTGCTGCCTATCCTGCAAATCTCCGTGA 992 || || | ||||| ||||| | |||| | || |||||| || | ||||| Sbjct 1334 GACTGCCAATGTCAATGCTTATGATTTACTGTTCTCCGCAACTCCTGCCAACATTCGTGA 1275 Query 993 ATTGCAAGTTGTCCTCCAATCCGTCT-CTGCCATTATTA----AAGATGTTGCTGAATGT 1047 | || ||||||||||||| || ||| || ||| | | | ||||| | ||||| Sbjct 1274 ACTGAAAGTTGTCCTCCAGTCAATCTACTCCCAGTTTGATGGAAAGAT-----TCAATGT 1220 Query 1048 AAGATACCCCTCGGTACCTATGTTGCTGATTATTCTTCTCCATCCATTATCCACCATGGA 1107 || | || || | | || |||| | ||||| || || | | | || | Sbjct 1219 AAACAGACTCTTAGTCAGTTTATTACTGAAACTGTCTCTCCTTCAATAACCAAGCACTGC 1160 Query 1108 TACTCCTCCTATGCTCTCCCAACTTGGTCCCATTCTGAGACCGAACAAAAAGTTGACCGA 1167 ||||| ||| || |||||||||||| |||| |||| |||| || | | ||| Sbjct 1159 TACTCTACCTTCGCGCTCCCAACTTGGAGCCATACTGAATCCGATGCTAAGCTGGCCCGC 1100 Query 1168 TTTGAAAATGCTACCACTTTCAATCTC---GTCACTGAAGATGCAAGAGCCCAAGATATC 1224 | | ||| |||||| || | | || | ||||| | |||||| ||||| | Sbjct 1099 T---ACTCTGCGACCACTGCCATTATTCAAGTTTCCGAAGAAGAAAGAGCTCAAGACTTT 1043 Query 1225 TGTTTTCTCCAACGCCCCACTCAAGCTATCCCACATGAACACAATGTGACTGATCTCATA 1284 || |||||||||||||| || ||||||| || |||| | | || | |||| | || Sbjct 1042 TGCTTTCTCCAACGCCCTGCTGAAGCTATACCCCATGCCAATGAAGTTAATGATGTTATT 983 Query 1285 TTCACCGCTGCTGGCGCTCCTGATACCGACATTCCCCTGCCTGCTAATCATGCAATCGTT 1344 | | |||| | || || | || | || | |||||||||||||||| ||| | Sbjct 982 TATGCTACTGCCGCCGAACCCAACACTGCTGTTGCTCTGCCTGCTAATCATGTCATCACT 923 Query 1345 CGTCGATTTCCGTTCTGCCTCCGCCTTGATGCCCCTGCTGAAAATGGCTTCCCTCGCCAT 1404 || || ||||| || ||||||| | || ||| ||| ||||| || || | |||| Sbjct 922 CGCCGTTTTCCCTTTGCCCTCCGCTGCCAAACCGCTGTTGAGAATGGATTTCCCCACCAT 863 Query 1405 GACAATGAAGATTTAGTTAAGTTTTCTGATGATACCCACAGTGCCCCTGGCGTTCTAGTC 1464 || || || ||| | ||| | ||| || || || || ||| ||||| || || Sbjct 862 GATAACGATGATCTCGTTCAATTTGAAGACCATGTGCATTCCGCTCCTCGCGTTTTACTC 803 Query 1465 CTCGATACCATCGGTGATGGTGTACTCTCTGCTCACCTCCCGACTCTCACTGGAAAAATA 1524 |||||||| | ||||||||| | | | ||||||| | ||| |||| |||||| Sbjct 802 CTCGATACAACTGGTGATGGTATTATTAATCCTCACCTTACCACTGCTGCTGGCAAAATA 743 Query 1525 ATCGAGTCATTTGAACTCGATGGTTCCACAATCGAAATGCCTGATGTAAGGAAATCACTC 1584 || || || || ||||||||||| || ||||| |||||||| || | | || | | Sbjct 742 ATTGAATCCTTCGAACTCGATGGATCAACAATTGAAATGCCCAATATCAATAAGCCTTTA 683 Query 1585 GGCATGCAAAACTGCATGTTCGCTGACTCTGCCGTCGCATATAAATATGTGCGCCCTGGC 1644 |||||||||||||||||||| ||||||||||| | ||||| || ||||| || |||||| Sbjct 682 GGCATGCAAAACTGCATGTTTGCTGACTCTGCTATTGCATACAAGTATGTCCGTCCTGGC 623 Query 1645 TCC---TACTGGCACCCTCGCGCCGCTGGATCTACTCTTCCTCCACTGAATCGAGCTCCA 1701 ||| ||| | |||| || | ||||| ||| || || || || ||||||| | Sbjct 622 TCCTTTTACAG--ACCC-CGTGACGCTGCCTCTGTCCTGCCGCCCCTCAATCGAGTAACT 566 Query 1702 CCCAATTCTCGTCCCCGTCTCCCGGCTTCGTCTCTGCTCCATGATAGAACCAAAGTTAT- 1760 || || || | ||||| || || || || ||| |||||||||| ||| ||||| ||| Sbjct 565 CCTGATCCTAGGCCCCGCCTACCCGCCTCCTCTTTGCTCCATGACCGAA-CAAAGGTATA 507 Query 1761 GCTGCCTCAACTCAATGTTCGGATTAATG--CTGCTCTCAATGACAATGCTCTCCCTGGT 1818 || ||| | || |||||| |||| | || | ||||| | | || |||||| Sbjct 506 CCTACCTTTGATTAACACTCGGATCAATGAACAGCCCAACATGAC--TACCCTTCCTGGT 449 Query 1819 CTTACCCGTGTTACGC-CTGTCAATGTTGTCCGCTACACCCAATCTTTCCTTGGATTCCG 1877 | | | || | | ||| || | | | || || || ||||| || ||||||| Sbjct 448 ATGA-CTGTCAGAAACAATGTTAACGCTCTGCGTTATACTCAATCCTTTATTGGATTTAA 390 Query 1878 CACAGTTGATAGTTCCAATAATGCTGCAAACCTCGATGCTGTCCCCGGGATGACTGAAGG 1937 || ||||| || || |||||||| || || || |||||||| | ||| || Sbjct 389 GACTGTTGACAGCTCATCCAATGCTGCTAATCTTGACGCTGTCCCTGCAATGGAAGAGAA 330 Query 1938 TCTTCTGATGCTCTGGTCTCCCTACACATACACTCCGTATG-AGTCTGGTGATTATCCAT 1996 | ||||||| | ||||| || || |||||||||||||||| || | | || ||| Sbjct 329 TAATCTGATGGTTTGGTCACCATATACATACACTCCGTATGAAGACGACTCCTT-CCCAG 271 Query 1997 TCGCTGATCTCAGTGCTTCTAGGCACTATTATCTGACCAACCTCCGTACCATCTTTGGTA 2056 ||||||| || || || ||||| |||||||||||||| |||||||||||||||| Sbjct 270 TCGCTGACCTTTCCAACTCCAGACACTACTATCTGACCAACCTGCGTACCATCTTTGGTA 211 Query 2057 CTGACTACAACTTGGTTTCAGTTAAGCATCCCTATGAAGCTTTCCCTGTCGTTTAAGCAA 2116 |||| | ||| || || ||| | || ||||||||| | | ||| |||| ||||| | Sbjct 210 CTGATTGTAACCTGATTGAAGTGATCCACCCCTATGAATCCTACCCCGTCGCCTAAGCGA 151 Query 2117 TTACTCTCTTTCCT-TTAATGCAATTTAAAGTTTTTGATGTTTAATTGGTTTCC-TTTAA 2174 || ||| ||| | || || ||||||||||| |||||||| ||||||| ||| Sbjct 150 TTTCTCAATTTTATCTTTAT----TTTAAAGTTTT---TGTTTAATCGGTTTCCTTTTGT 98 Query 2175 TGACAATCGCGTGTATACTACGCGgttcttttgtttcgtttttcttctgaactttttagt 2234 |||||||| ||||||| ||||| | |||||||||||||||| | ||| ||||||| || Sbjct 97 TGACAATCACGTGTATGCTACGTGATTCTTTTGTTTCGTTTAT-TTCCGAACTTTCCTGT 39 Query 2235 tcagcgttttcaacgttgttttctgtttATGA 2266 | |||| | |||| |||||| |||| || Sbjct 38 T--TGTTTTTTATCGTTATTTTCT-TTTAAGA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7402123590110