Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_021148.1 Length=2354 Score E Sequences producing significant alignments: (Bits) Value seq62812 518 5e-144 >seq62812 Length=2273 Score = 518 bits (574), Expect = 5e-144 Identities = 1240/1847 (67%), Gaps = 65/1847 (4%) Strand=Plus/Minus Query 391 TCTATGGCTTCTTCCTCGTCAATGACCTTCATGTCCGTCCTGCTCCGTCTGCTCACGCCC 450 ||||||||| |||||| | ||||| ||||| |||| | |||||| ||||||||||||| Sbjct 1884 TCTATGGCTATTTCCTCTTGAATGATCTTCACATCCGCCTTGCTCCTTCTGCTCACGCCC 1825 Query 451 GCTCTTGGGCTGAAACCTCCTGGAAAGATGACTTTGTCAATTTTCTTATGAACGTCCCTG 510 |||| ||||||||| ||| |||||| ||| || | | || || | |||| | Sbjct 1824 GCTCCTGGGCTGAAGTCTCATGGAAAATTGATTTCGCTGAATTCCTGCTCGGTCTCCCCG 1765 Query 511 TTCCCGAGTTTCTGACTACCATTCTCTCCCAGTTCCATGCCTTTGAAACTGACAGAACAA 570 |||| || || || | | ||||| ||||| | || |||| ||||| ||||| | Sbjct 1764 TTCCTGAATTCCTTGTTCCAATTCTATCCCAATATCAGCACTTTATCACTGATAGAACCA 1705 Query 571 AGAATGTTTTCTTTGTTCCATCTGCTGCTGGTTATGATCACGACCAATTCTTTGGACGTG 630 |||| || ||| || ||||||||||||| ||| || ||||||||||||||||| | Sbjct 1704 AGAACGTGCATTTTACACCTTCTGCTGCTGGTTTTGACCATGACCAATTCTTTGGACGCG 1645 Query 631 TTTACCCTCTGAATATGTTTGCAACAATCCATGACTGCACTGCTAACCTACCTGGCAA-- 688 ||| ||| |||| |||||||| | ||||||| ||| ||||| |||||| | || Sbjct 1644 TTTTTCCTTTGAAAATGTTTGCTGCCCTCCATGATTGCGTTGCTACTCTACCTAGTAATG 1585 Query 689 CTCCTCAAAAATTGATGTTCTCAAAGACCTTTACTCAAAAGTTCTTTATTCCATTCAAGT 748 || ||| | | ||| | | | |||| | ||| || | ||| | Sbjct 1584 CTACTCTGGC--TCAAGTTTTACAGAATGTTTATAGTCGTGATCTCTACACGATTACTGA 1527 Query 749 GCCCAACTTTACCTGCTGTATTCCCGATCTTATCGGTGTTACAATTAGT-CAAGTGACTA 807 || ||| | || | |||||| ||||| | || | || | | | ||| ||| Sbjct 1526 ACCTCGCTTCTCGTGTTATATTCCTGATCTATTAGGATTAACCCTGACCGCTGGTG-CTA 1468 Query 808 A---CACTACTGCCAACCATCTGAATTCAAAACTCTTCCAAGTGT--TTAATTCATTGAT 862 | ||| ||| || || | || || || ||| || | | | || || | | Sbjct 1467 ATGTCACCACTTTGAATTATGTCAACTCTAAGATCTATCAGATCTACTCAA--CAATATT 1410 Query 863 AAACCCTGTGCTGTTCCGCGACTTCCAACGCCGCTCCACTCTTGCTGCTCTCTCATTCAA 922 || ||||| ||||||||||| ||||||| ||||| | |||||||| ||||||||||| Sbjct 1409 CAATCCTGTCCTGTTCCGCGATCTCCAACGTCGCTCTTCACTTGCTGCACTCTCATTCAA 1350 Query 923 GTCCCCAACATACCAAACTGATGATATCAACGCCTATGACCTGCTCTTCTCTGCAACTCC 982 || || || |||| |||| || |||| || ||||| | || ||||| |||||||| Sbjct 1349 ATCACCCACCTACCCGACTGCCAATGTCAATGCTTATGATTTACTGTTCTCCGCAACTCC 1290 Query 983 TGCGAATCTACGCGAGTTGAAAGTTGTTATGCAAGCTGTCTCTGCCGTGCTAGCTGATTC 1042 ||| || | || || |||||||||| | || | ||| || | | | || Sbjct 1289 TGCCAACATTCGTGAACTGAAAGTTGTCCTCCAGTCAATCTACTCCCAGTTTGATGGAAA 1230 Query 1043 TGTCCCGTGTAAATCTACACTTGGACGTTTTATTGCCGAAAACTCATCAAGTGCCATAAT 1102 | | |||||| || ||| | | |||||| | |||| || | | |||| Sbjct 1229 GATTCAATGTAAACAGACTCTTAGTCAGTTTATTACTGAAACTGTCTCTCCTTCAATAAC 1170 Query 1103 CAAACATGGCTACTCAACGTATGCTCTACCAACCTGGTCACACAACGAGAACTCTAATAA 1162 ||| || ||||||| || | || || ||||| ||| || | || | | ||| Sbjct 1169 CAAGCACTGCTACTCTACCTTCGCGCTCCCAACTTGGAGCCATACTGAATCCGATGCTAA 1110 Query 1163 GTCCTCGCTATTTGCTGCTGTTACCACACACAATCTC---GTATCTGAAGAANAACGAGC 1219 | || || | || ||| ||||| || | | || || |||||| || |||| Sbjct 1109 G--CTGGCCCGCTACT-CTGCGACCACTGCCATTATTCAAGTTTCCGAAGAAGAAAGAGC 1053 Query 1220 TGAAGACTTCTGTTTCCTACAACGCCCGTCTCAAGAAATTCCTCATACTCATGAGCTGAA 1279 | ||||||| || || || |||||||| || ||| || || ||| | |||| | || Sbjct 1052 TCAAGACTTTTGCTTTCTCCAACGCCCTGCTGAAGCTATACCCCATGCCAATGAAGTTAA 993 Query 1280 TGATCTGC-----GATAC-GTCGCCGATACTGACAAAAGTACTGCTGTTGCGCTCCCTGC 1333 |||| | | ||| | |||||| | ||| |||||||||| || ||||| Sbjct 992 TGATGTTATTTATGCTACTGCCGCCGAACCCAACA------CTGCTGTTGCTCTGCCTGC 939 Query 1334 CAATCATAGTATTATTCGTACTTTTCCTCTCTGCC-TCCGCTACAATTCCAGTCAGAAGG 1392 |||||| || | ||| |||||| || |||| |||||| | | || | || Sbjct 938 TAATCATGTCATCACTCGCCGTTTTCC-CTTTGCCCTCCGCTGCCAAACCGCTGTTGAGA 880 Query 1393 ATGGCTTTCCTCGCCACAACAATAATGATCTCATCAAGTTCCAAGATGAAATCCATACTT 1452 |||| ||||| | ||| | || |||||||| | | || |||| | | ||| | Sbjct 879 ATGGATTTCCCCACCATGATAACGATGATCTCGTTCAATTTGAAGACCATGTGCATTCCG 820 Query 1453 ACCCAAGCGTTTTAGTGCTCGATACTGATGGTGACCTTACTGTCACTGCTCATCTGCCC- 1511 || |||||||| | |||||||| |||||| || | | | | |||| || || Sbjct 819 CTCCTCGCGTTTTACTCCTCGATACAACTGGTGATGGTATTATTAATCCTCACCTTACCA 760 Query 1512 CTACTTGCTGGAAAGATTATTGAATCTTTCGAAATTGATGGTACAACAATTGAAATGCCC 1571 || || ||||| || || |||||||| |||||| | ||||| ||||||||||||||||| Sbjct 759 CTGCT-GCTGGCAAAATAATTGAATCCTTCGAACTCGATGGATCAACAATTGAAATGCCC 701 Query 1572 AACACTTTCAAGTCTCTAGGCATGCAAAACTGCATGTTTGCTGATTCTGCCATCCCTTAC 1631 || | ||| || |||||||||||||||||||||||||||| ||||| || | ||| Sbjct 700 AATATCAATAAGCCTTTAGGCATGCAAAACTGCATGTTTGCTGACTCTGCTATTGCATAC 641 Query 1632 AAGTATGTCCTGCCCGGATCCTACTATCATCCTCGCACTACTGGCACTGTTCTCCCTCCC 1691 |||||||||| || || |||| || || || ||| | |||| || || ||| Sbjct 640 AAGTATGTCCGTCCTGGCTCCTTTTACAGACCCCGTGACGCTGCCTCTGTCCTGCCGCCC 581 Query 1692 TTGAACCGAGCTCCCCCGAACTCCAAGCCTCGTCTGCCCGCATCTACCTTGCTCCATGAC 1751 | || |||| | || | | | ||| || || ||||| || | |||||||||||| Sbjct 580 CTCAATCGAGTAACTCCTGATCCTAGGCCCCGCCTACCCGCCTCCTCTTTGCTCCATGAC 521 Query 1752 CGCCTCAAAATCATGC--TCCCTCGATTTAATGTCGCAATTGCTGAACA---AAACATTG 1806 || |||| || | || | |||| | ||| || |||||| ||||| Sbjct 520 CG-AACAAAGGTATACCTACCTTTGATTAACACTCG-GATCAATGAACAGCCCAACAT-- 465 Query 1807 GAAATACCCTTCCAGGTATGACTCCAATTGCTCCTGTCAATGTGCTCCGTTACATTCAGT 1866 | ||||||||| ||||||||| | ||| || | || ||||| | ||| | Sbjct 464 -GACTACCCTTCCTGGTATGACTGTCAGAAACAATGTTAACGCTCTGCGTTATACTCAAT 406 Query 1867 CCTTTTTAGGATTTAGAACTGTTGATGCCTCCTCCAATGCTGCTACTCTTGATGCTGTCC 1926 ||||| | ||||||| |||||||| ||| ||||||||||||| |||||| ||||||| Sbjct 405 CCTTTATTGGATTTAAGACTGTTGACAGCTCATCCAATGCTGCTAATCTTGACGCTGTCC 346 Query 1927 CGTCGATGCCCACTGATCGCCTAATGGTTTGGTCTCCCTACACATACACCCCATATGAAC 1986 | | ||| || || ||||||||||| || || |||||||| || |||||| Sbjct 345 CTGCAATGGAAGAGAATAATCTGATGGTTTGGTCACCATATACATACACTCCGTATGAA- 287 Query 1987 CTGATGACT--ATCCCATTC-CTGATCTTGGCGCTTCAAGGCACTACTATTTGACCAATC 2043 || |||| ||||| || |||| ||| | || || ||||||||| ||||||| | Sbjct 286 --GACGACTCCTTCCCAGTCGCTGACCTTTCCAACTCCAGACACTACTATCTGACCAACC 229 Query 2044 TTCGTACCATTTTCGGTACTGACTACAACCTTGTTCAAACCAAGCACCCTTATGAAGCTC 2103 | |||||||| || |||||||| | ||||| || || | ||||| |||||| | Sbjct 228 TGCGTACCATCTTTGGTACTGATTGTAACCTGATTGAAGTGATCCACCCCTATGAATCCT 169 Query 2104 TCCCCGTCGTGTAAGCAATTACTCTCA---TCCCCCTTATTTAAGTATAAGTTTATGATG 2160 |||||||| ||||| ||| ||||| | | |||||| | |||||| || Sbjct 168 ACCCCGTCGCCTAAGCGATT--TCTCAATTTTATCTTTATTTTA----AAGTTT---TTG 118 Query 2161 TTTAATTGGTTCCC--TTCTCGACAAACACGTGTATGCTACGTGATT 2205 |||||| |||| || || | ||||| |||||||||||||||||||| Sbjct 117 TTTAATCGGTTTCCTTTTGTTGACAATCACGTGTATGCTACGTGATT 71 Score = 80.6 bits (88), Expect = 4e-12 Identities = 82/102 (80%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 1 AGATTTTATTAAAGCGCCCCGAACTTTAGTAATTAAGAACTCACATTCGTCTAAATTATC 60 ||||||| | ||||||||||| |||| | ||||||||| ||||||||||||| ||||| Sbjct 2272 AGATTTTTCTTAAGCGCCCCGA-CTTTTGAAATTAAGAATTCACATTCGTCTACGTTATC 2214 Query 61 AAGCTATAACAAAG-CCCCTGCTCTAATATAATACGATGTCT 101 ||| | ||||| |||||||||||| | || ||||||| Sbjct 2213 AAGTCACT-CAAAGACCCCTGCTCTAACCT-TTAAGATGTCT 2174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7418110898080