Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_022617.1 Length=1710 Score E Sequences producing significant alignments: (Bits) Value seq72430 98.7 1e-17 seq68663 77.0 3e-11 >seq72430 Length=393 Score = 98.7 bits (108), Expect = 1e-17 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 533 TCTCATCTCTCATCTGCAAATCCATGAATGCATGATCCCTGGACCTTTAGTTCCTTTCTT 592 ||||| || | || ||||| | || || ||| |||| ||||| |||| || ||||| Sbjct 330 TCTCACTACTGACCTTCAAATTGAAGAGTGTATGGTCCCCGGACCACTAGTCCCCTTCTT 271 Query 593 TCAATCCCTTGCTGCCGTAAATGGCCCTTTTGACTGGATAGGTGACATTACTCCTGCCAT 652 |||||| | || | | ||||||||||||||||||||||| || || ||||||||| | Sbjct 270 CCAATCCTTGGCCTCTATCAATGGCCCTTTTGACTGGATAGGCGATATCACTCCTGCCCT 211 Query 653 GCCTGCTTTTGCAAGTCTCTGGAATGC 679 |||| |||| ||||||| |||| Sbjct 210 CCCTGGATTTGATTCTCTCTGGGATGC 184 >seq68663 Length=225 Score = 77.0 bits (84), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 9/155 (6%) Strand=Plus/Plus Query 1450 TCAGCCTTAAGGTGCAATATGCTCAAATTATTGCCTCTCGCTACCACCAGCTTGCTGCCA 1509 || |||| ||| || ||||| || | || || |||||||| ||||| ||||| |||| Sbjct 31 TCGGCCTCAAGACTCAGTATGCCCAGCTCATCGCTTCTCGCTATCACCAACTTGCCGCCA 90 Query 1510 ACCGTGCTGAATAG--ACCTC-TGACCCTGAT-GTCAACAAACT-CACTTTTTGCTGTCC 1564 |||||| || | ||||| ||||| || ||||| ||||| | ||||||| || Sbjct 91 ACCGTGTCGACTGACAACCTCCTGACCTAGAACGTCAATAAACTTCTAATTTTGCTATCT 150 Query 1565 TTAACCGATAGTCATTCTGATCAGATTGGAttttt 1599 || |||||| |||||||||||| | | ||||| Sbjct 151 TT----GATAGTTATTCTGATCAGAATAGTTTTTT 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5358945631544