Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_028251.1 Length=2462 Score E Sequences producing significant alignments: (Bits) Value seq62892 455 5e-125 >seq62892 Length=2478 Score = 455 bits (504), Expect = 5e-125 Identities = 874/1275 (69%), Gaps = 14/1275 (1%) Strand=Plus/Plus Query 659 TACTGCCGTCCCAAAGGCACAACTGATGGTACATTCCGTGACTTTAATAAAGAACAAAAA 718 ||||| || ||| || || ||||| |||||| ||| |||||||||||||| | Sbjct 620 TACTGTCGACCCTCTGGTACTGTTGATGCTACATTTTCTGATTTTAATAAAGAACAGATC 679 Query 719 CCATGTcccccccTCGACTCTGATCGAAAAGAACATGTCCTCAAACACGTCTTTAAACGT 778 |||| | |||| | |||| | ||||||| || ||||| || | | || Sbjct 680 CCATCTGCCCCTATTGACTACTACAGAAAAGACCAAGTCCTTGTCCATATACTCAAGTTC 739 Query 779 CTCGCAATCGACCCCTATCTTCCCCTCCACTTTGTCGACACGCAATACTGCAAACTTCCC 838 || | | | || || || ||||| || || || || || || || ||||| ||| Sbjct 740 CTTGATGCCAAACCTTACCTACCCCTTCATTTCGTTGATACCCAGTATTGCAAGACTCCT 799 Query 839 CTTGTTACAGGAACTGGCTATCACAACAGATACTCCTATAGACAGAAAGCTCACGCTTCC 898 ||||| || ||||| ||||| || || | || || | || ||||||||| || ||| Sbjct 800 CTTGTAACTGGAACCGGCTACCATAATCGCTATTCTTTTAAACAGAAAGCGCATGCTAAG 859 Query 899 TTTTCACATCCCCTCCAGTATGGCTCCCGCCCCACCTCCAAAGGCTATTTCTACAACGCA 958 | ||| || || | |||||||| | || ||||||||||| ||||| || || || Sbjct 860 TATTCTCACCCTCCCCAGTATGCAACTAAACCAACCTCCAAAGGTTATTTTTATAATGCT 919 Query 959 ACTTATGAAAACGCCCGCACAATCATTCACAATATCAAAGAATCCGGTGTTCCTTTCAAC 1018 ||||| || || ||||||||| | ||||| || || || ||| | || || || Sbjct 920 ACTTACGAGAATGCCCGCACATTAATTCATTTGATTAAGAAACACGGATTACCATTTAA- 978 Query 1019 ATCCACTT--TGCTCCTGAAGACAGAGATATCACTGATACTGAAATCGATGAATATCGCC 1076 ||| || ||| |||||| ||| ||||||| |||| || | | | || Sbjct 979 -TCCCGTTGTTGCACCTGAAACTTCTGATCTCACTGACTCTGACATTCA-GTCTTTCATT 1036 Query 1077 GCAAATGCAA-CAACTTCTTCGACCAATATCCGACACTCCTTTTTACTAGAAACCACATT 1135 | ||||| || |||||| | | || ||||| | || || ||| | ||||||||| Sbjct 1037 GACTCTGCAAACAGTTTCTTCAATGATTACCCGACGTTACTGTTCACTCGCAACCACATT 1096 Query 1136 TCCAACAGAGATGGTACTCTTAAAGTACGCCCTGTTTACGCCGTCGATGACATCTTCATC 1195 || || | ||||| | ||||||||| ||||| |||||||| || |||||||| || || Sbjct 1097 TCGAAACGTGATGGAATTCTTAAAGTCCGCCCCGTTTACGCAGTTGATGACATTTTTATA 1156 Query 1196 ATTATTGAAGCTATGCTCACCTTCCCTGCGCTCGTTCAAGCTCGCAAACCCGACTGCTGC 1255 || || ||| ||||| || |||||| | ||||||||||| |||||| ||| ||| Sbjct 1157 ATCATCGAACTCATGCTTACATTCCCTTTGACTGTTCAAGCTCGAAAACCCTCCTGTTGC 1216 Query 1256 ATTATGTATGGACTCGAAACAATTCGTGGCGCAAACCACAAACTTGACTCACTCGCTCAG 1315 || ||||||||||||||||| ||||| || |||| || | |||| | | |||| Sbjct 1217 ATAATGTATGGACTCGAAACTATTCGAGGTTCAAATCATTACATTGAACAAATAGCTCGT 1276 Query 1316 TCCTTTTCTACTTATTTCACAATTGACTGGTCCGGCTATGACCAACGCCTTCCCCGCGCT 1375 || ||| || | || | | || |||||| | ||||| |||||||| || |||| Sbjct 1277 GACTATTCGACCTTCTTTTCTTTAGATTGGTCCAGTTATGATCAACGCCTCCCGCGCGTC 1336 Query 1376 ATCACTGATTTATTTTACACCGACTTTTTACGTCGCCTAATTGTAATATCTCATGGCTAC 1435 ||||||||| | | |||||| |||||| | || | || || || ||| ||||| ||| Sbjct 1337 ATCACTGATATTTATTACACTGACTTTCTCCGCAGTCTTATAGTGATAAACCATGGATAC 1396 Query 1436 CAACCCACTTATGAATACCCTACCTACCCCGATCTAAATGAAGACAACATGTATGACCGT 1495 ||||| || ||||||||||| || ||||| || || ||||| |||| ||||||| | Sbjct 1397 CAACCGACCTATGAATACCCCACTTACCCTGACCTTGATGAACACAAGTTGTATGATAGA 1456 Query 1496 ATGGACAAGCTCCTCAAATGGCTTCACCTATGGTACAATAACATGACCTTCGTCACTGCC 1555 ||||| || || ||| | | || ||| ||||||||||||||||| ||| | ||| || Sbjct 1457 ATGGATAATCTACTCTATTTTCTCCACACTTGGTACAATAACATGACTTTC-TTACTACC 1515 Query 1556 -GATGGCTACGCCTATCGCCG--CATGTACGCTGGTGTCCCTTCTGGACTCTTCAACACC 1612 ||||| || ||||| ||||| | ||| || ||||| || |||||||| | |||||| Sbjct 1516 TGATGGTTATGCCTACCGCCGAACCTGT-TGC-GGTGTACCCTCTGGACTATACAACACA 1573 Query 1613 CAATTCCTCGATTCTTTCGCTAACCTATATATTCTAATAGATGGCATGATCGAATTTGGC 1672 |||| ||| |||||||| | || |||| | | ||||| | |||||| ||||| || Sbjct 1574 CAATACCTTGATTCTTTTGGCAATCTATTCCTAATCATAGACGCCATGATTGAATTCGGA 1633 Query 1673 TTCACCGACGAAGAGATTGACTCCTTTCTCTTATTCGTCCTAGGTGATGACAATTCTGGC 1732 ||| || || || || ||| || | | || |||| ||||| || |||| Sbjct 1634 TTCCTTGATTCCGAAATCGAGAATTTTATCCTCCTAGTTTTAGGAGATGATAACACTGGT 1693 Query 1733 ATGACCAACCTGTCTCTCGCTCGCCTTCATGAATTCATTCAATTCCTTGAAGCCTACGCT 1792 ||||| | | || | ||| | ||| ||||| || |||||| || || Sbjct 1694 ATGACGACTATCCCTATATGTCGTATGTTTGATTTCATCACTTTTCTTGAAAAATATGCC 1753 Query 1793 CTCACTCGTTATCACATGGTCCTCTCCCACACAAAATCAGTCATTACCGCTCTCCGCAAC 1852 || || ||| |||||||||| || || ||||| || | || | | ||| Sbjct 1754 CTTCAACGGTATAACATGGTCCTTTCTGCGACCAAATCCGTTCTAACGACATTACGCTCA 1813 Query 1853 AAGATCGAATCGCTTGGTTATCAATGTAACTTTGG-CCTCCCAAAACGTGACATCGGTAA 1911 || || || || || ||||| |||||| ||| ||||| || ||||| |||| ||| Sbjct 1814 AAAATTGAGTCTCTAGGTTACGCCTGTAACCATGGATCTCCC-AAGCGTGATATCGATAA 1872 Query 1912 ACTTGTCGCTCAGCT 1926 |||||| || || || Sbjct 1873 ACTTGTTGCCCAACT 1887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7763436750232