Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_031134.1 Length=2397 Score E Sequences producing significant alignments: (Bits) Value seq62892 1424 0.0 >seq62892 Length=2478 Score = 1424 bits (1578), Expect = 0.0 Identities = 1691/2280 (74%), Gaps = 44/2280 (2%) Strand=Plus/Plus Query 99 AACGTCTCACCATGCCTTACAACGCTGTCCGCAATTATCTTGCTGAACGTATGATCCGCA 158 |||||||||||||||| | |||| | ||||||||||| ||| ||||| ||| |||| Sbjct 84 AACGTCTCACCATGCCGTTCAACTCAGTCCGCAATTACCTTAGCGAACGCTTGACCCGCC 143 Query 159 CAAAAAGAGAATGGCAACTTTACCAATCCTCTAACCGTGATCCTGAATCGACTCTTGAAC 218 || | |||| | |||||| || || | ||||||||| || |||||| | Sbjct 144 TGAAGATTGAATTTAAGACTTACCAGTCTAACAATCATGATCCTGATAAGATTCTTGAGC 203 Query 219 ATTATCAAGATTCTGACTACTTACGTTATTACCAGAATGCCCGTTTTAACCTTAACCAAG 278 | ||||||| | ||||| ||||| ||| | ||||| |||| ||| | | | | Sbjct 204 AAACTCAAGATCCCGACTATCGTCGTTACTACGACAATGCTCGTTATAATAATGATAATG 263 Query 279 AA--GAACGA--TTCCGCGCCTTAAACAAAGAATACTCTACACTAGTTGAAGCATTTAGA 334 || ||| | || || | || || ||||| ||||| || || ||||| | | | Sbjct 264 AAAAGAAACACCTTATGC----TTAATAAGGAATATTCTACTCTTGTCGAAGCTTATCGC 319 Query 335 ACTGACAA--CCTACGAAAGCACCAACCTTATGAGCTTCACCAGCCCATTCCTCCTGATG 392 |||||||| ||| | |||| |||| | ||||| || |||||||| | ||| | || | Sbjct 320 ACTGACAATGCCTCC--AAGCGCCAAACGTATGAACTACACCAGCCTGTCCCTTCCGACG 377 Query 393 CTGCCCCTATTCCTGACAAACGTCAGCCTGCCCCTGGAATTAAATTAGTCCCACTCATGT 452 ||||||| ||| | | || ||| || || |||||||| || ||||||| ||||||| Sbjct 378 CTGCCCCAATTGTTCAAAATCGTATTCCCGCACCTGGAATCAAGCTAGTCCCCCTCATGT 437 Query 453 ACCACTATGGACATGTTGTTCATGATACCCCTTCTACTACTGATGATCATACATCAAATG 512 |||| ||||| |||||| || |||| || || || |||| | |||| | || Sbjct 438 ACCATTATGGTCATGTTACTCGTGATCCCACTCCTCAGCCTGAACAAGATACCTT---TG 494 Query 513 ATGATTCT--CAATCAGCACCATCCAGA-----CTGTT---AAAAACTACTGAATTTGGT 562 |||||||| | || | | ||| | | ||| | ||||||| || | Sbjct 495 ATGATTCTGCCGTTCTACTTGACCCACATGTACCCGTTTCAACAAACTACGGATT----- 549 Query 563 TACTCCATTGACAAACAAATCTATGATCTCGTTTGCCGTAGATATCCTACTTATTTATCA 622 | | ||||| | ||||||||| | || | || ||||| ||| ||| | Sbjct 550 --CCCAATTGATGATCAAATCTATCAACTTATCTGTTTCAGATACCCTCAATATCTGAAT 607 Query 623 GTTATTAACTTGTACTGTCGACCCCTCGGTACTGTAGATGCTACATTCTCTGACTTTAAC 682 ||||| |||| ||||||||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 608 GTTATAAACTCGTACTGTCGACCCTCTGGTACTGTTGATGCTACATTTTCTGATTTTAAT 667 Query 683 AAAGAACAGATACCATCTAATCCGATTGA-TCCTGATAGGAAAGAACATGTTCTGAAACA 741 ||||||||||| |||||| || ||||| | || | || ||||| || || || || Sbjct 668 AAAGAACAGATCCCATCTGCCCCTATTGACTACT-ACAGAAAAGACCAAGTCCTTGTCCA 726 Query 742 CATTTTTAAGTTTCTGGACGCCACCCCTTACTTACCTGTCCACTTTGTTGACACTCAATT 801 || | ||||| || || |||| |||||| |||| | || || ||||| || || | Sbjct 727 TATACTCAAGTTCCTTGATGCCAAACCTTACCTACCCCTTCATTTCGTTGATACCCAGTA 786 Query 802 CTGCAAGACTCCTCTTGTTACTGGAACTGGCTACCATAACCGCTATTCTTTCAAACAGAA 861 ||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||| Sbjct 787 TTGCAAGACTCCTCTTGTAACTGGAACCGGCTACCATAATCGCTATTCTTTTAAACAGAA 846 Query 862 AGCACATGCAAAGTATTCTCACCCTGAGGAATATGCCACATACCCTTCCTCTAAAGGCTA 921 ||| ||||| ||||||||||||||| | ||||| || | || |||| ||||| || Sbjct 847 AGCGCATGCTAAGTATTCTCACCCTCCCCAGTATGCAACTAAACCAACCTCCAAAGGTTA 906 Query 922 CTTCTACAATGCTACTTATGAGAATGCCCGCACTTTGGTTCACTACATCAAACAAAATGG 981 || || ||||||||||| |||||||||||||| || |||| | || || || | || Sbjct 907 TTTTTATAATGCTACTTACGAGAATGCCCGCACATTAATTCATTTGATTAAGAAACACGG 966 Query 982 TCTACCATTTGAATTTGATTTTAATCTCTCTGAAGAATCC---CTGACCGACGAACAAAT 1038 |||||||| | | | || | ||||| || || || ||| | || Sbjct 967 ATTACCATTTAATCCCGTTGTTGCAC---CTGAAACTTCTGATCTCACTGACTCTGACAT 1023 Query 1039 TGATTTATTCGTCAACAGATCCAATGCCTTTTTCAATGATTACCCGACGTTACTATTCAC 1098 | | | ||| | || | || || ||||||||||||||||||||||| ||||| Sbjct 1024 TCAGTCTTTCATTGACTCTGCAAACAGTTTCTTCAATGATTACCCGACGTTACTGTTCAC 1083 Query 1099 TCGTAATCACATTTCGAAGCGTACTGGACCACTAAAAGTCCGCCCTGTTTACGCTGTTGA 1158 ||| || ||||||||||| ||| |||| || ||||||||||| |||||||| ||||| Sbjct 1084 TCGCAACCACATTTCGAAACGTGATGGAATTCTTAAAGTCCGCCCCGTTTACGCAGTTGA 1143 Query 1159 TGATATTTTTATCATTATTGAACTGATGTTGACCTTCCCTCTCACTGTTCAAGCTCGAAA 1218 ||| |||||||| || || ||||| ||| | || |||||| | ||||||||||||||||| Sbjct 1144 TGACATTTTTATAATCATCGAACTCATGCTTACATTCCCTTTGACTGTTCAAGCTCGAAA 1203 Query 1219 ACCCTCATGCTGTATTATGTACGGCTTCGAAACCATTCGTGGCTCTAACCGATACATTGA 1278 |||||| || || || ||||| || ||||||| ||||| || || || | |||||||| Sbjct 1204 ACCCTCCTGTTGCATAATGTATGGACTCGAAACTATTCGAGGTTCAAATCATTACATTGA 1263 Query 1279 CAGACTTGCCCGTTCGTATTCGACCTTCTTTTCATTAGACTGGTCAAGTTATGATCAACG 1338 | | || ||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct 1264 ACAAATAGCTCGTGACTATTCGACCTTCTTTTCTTTAGATTGGTCCAGTTATGATCAACG 1323 Query 1339 ACTGCCCCGTGTAATTACTGACATTTATTACACTGACTTCCTTCGAAGCCTGATCGTTAT 1398 || || || || || ||||| ||||||||||||||||| || || || || || || || Sbjct 1324 CCTCCCGCGCGTCATCACTGATATTTATTACACTGACTTTCTCCGCAGTCTTATAGTGAT 1383 Query 1399 TAACCATGGATACCAACCCACGTATGAATACTCCTCTTACCCTGACCTTGATGAACATAA 1458 ||||||||||||||||| || ||||||||| || |||||||||||||||||||||| || Sbjct 1384 AAACCATGGATACCAACCGACCTATGAATACCCCACTTACCCTGACCTTGATGAACACAA 1443 Query 1459 GCTCTATGATAGAATGAATAATCTTCTTTTCTTTCTTCATACATGGTATAACAATATGAC 1518 | | |||||||||||| ||||||| || | ||||| || || ||||| || || ||||| Sbjct 1444 GTTGTATGATAGAATGGATAATCTACTCTATTTTCTCCACACTTGGTACAATAACATGAC 1503 Query 1519 CTTCCTTCTCCCGGATGGTTTTGCATACCGCAGATCTTACTGTGGAGTCCCTTCTGGCCT 1578 ||| | || || ||||||| ||| |||||| || | | || || || || ||||| || Sbjct 1504 TTTCTTACTACCTGATGGTTATGCCTACCGCCGAACCTGTTGCGGTGTACCCTCTGGACT 1563 Query 1579 CTACAATACTCAATACCTTGATTCTTTTGGCAATCTATTTTTAATAATTGATGCCATGAT 1638 ||||| || ||||||||||||||||||||||||||||| |||| || || |||||||| Sbjct 1564 ATACAACACACAATACCTTGATTCTTTTGGCAATCTATTCCTAATCATAGACGCCATGAT 1623 Query 1639 TGAATTCGGTTTCACTGACTCTGAAATCGATGGATTTGTCCTCCTAATTTTAGGTGATGA 1698 ||||||||| ||| ||| || |||||||| ||| |||||||| ||||||| ||||| Sbjct 1624 TGAATTCGGATTCCTTGATTCCGAAATCGAGAATTTTATCCTCCTAGTTTTAGGAGATGA 1683 Query 1699 CAACACTGGTATGACACAGATGCACATTCATCGCATCTCCCAATTCATCAACTTTCTTGA 1758 |||||||||||||| || | || ||| || | | ||||||| |||||||| Sbjct 1684 TAACACTGGTATGACGACTATCCCTATATGTCGTATGTTTGATTTCATCACTTTTCTTGA 1743 Query 1759 AAAATATGCTTTAGAACGCTATAACATGGTCCTCTCTGCGACCAAATCTGTTCTAACAAC 1818 ||||||||| | |||| |||||||||||||| |||||||||||||| |||||||| || Sbjct 1744 AAAATATGCCCTTCAACGGTATAACATGGTCCTTTCTGCGACCAAATCCGTTCTAACGAC 1803 Query 1819 TCTGCGCTCAAAAATTGAGACCCTCGGTTACCAATGTAACTATGGATCCCCTAAACGCGA 1878 | ||||||||||||||| | || |||||| |||||| ||||||| || || || || Sbjct 1804 ATTACGCTCAAAAATTGAGTCTCTAGGTTACGCCTGTAACCATGGATCTCCCAAGCGTGA 1863 Query 1879 CATTGATAAACTTGTTGCCCAACTCTGTTTCCCTGAAAATGGACTCAAGCCACACACCAT 1938 || ||||||||||||||||||||||||| ||| || ||||| | |||||||||||||| Sbjct 1864 TATCGATAAACTTGTTGCCCAACTCTGTTACCCAGAGAATGGCTTAAAGCCACACACCAT 1923 Query 1939 GTCTGCTAGAGCTGTCGGAATCGCATATGCCGCTGCCGGCCAAGATTACGTATTTCACTC 1998 | |||| ||||| | || || ||||||||| | || ||||||||| ||||||||||| Sbjct 1924 GGCTGCCAGAGCAATAGGTATTGCATATGCCTCCGCTGGCCAAGATGTTGTATTTCACTC 1983 Query 1999 CTTTTGCCAGGATGTATATAATATGTTTAGGTCTTATTATAAACCCGATGCTCGTGCAAA 2058 |||||||||||||||||| ||||| ||||||||| |||| || || | || | || Sbjct 1984 CTTTTGCCAGGATGTATACAATATATTTAGGTCTAGTTATCGCCCTGACGACCGCACTAA 2043 Query 2059 TCTATTCTTCCAACGTCAAGTACTCCAAAATCTTGAAGATGGAATCCCTGATTTAGCCAC 2118 ||| || |||||||| || | | || || ||||||||||||||||| ||| | || | Sbjct 2044 TCTCTTTTTCCAACGACAGTTGTTTCACAACCTTGAAGATGGAATCCCCGATCTTGCGCC 2103 Query 2119 ACCGGTTGTGCCGCCATTCCCTTCATTATTCGAAGTCCGCGAGATGTACTCTGAATACAA 2178 || ||||||| || || |||||| | | ||| ||| || ||||| | ||| Sbjct 2104 GCCAATTGTGCCCCCGTTTCCTTCACTCTATGAAATCCAGGACGCCTACTCGTATTACCG 2163 Query 2179 AGGACCTCTCTCTTTTGAACCTAAATGGAACAAAGCTCACTTCATAAATGACCCGAAT-- 2236 ||| ||||| | || |||||||||||| | |||| ||||| |||| || || Sbjct 2164 AGGTCCTCTGGAATATGCTCCTAAATGGAACTATTCTCATTTCATTCATGATCCAGATTC 2223 Query 2237 GACATCCCTCCTTTCTCCAAAACTATGCGAGACTATGAAAAGGAACATAATCTTCCTGTT 2296 |||| || || | |||| |||||| | | |||||| ||||||||| | | | Sbjct 2224 GACA--CCACCCCACCCCAAGACTATGAGCGCTTATGAAGTTGAACATAATATGTCAACT 2281 Query 2297 CGAGTTTCACCTACTTTTGAAACGGTCGTGCCTAGCACAAAAAATTTGCCGTAAtttttt 2356 || ||| | ||||||||||||||||||||||| ||||| | ||||||||||| ||| ||| Sbjct 2282 CGCGTTGCTCCTACTTTTGAAACGGTCGTGCCCAGCACTAGAAATTTGCCGTGATTATTT 2341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7555601746622