Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_010348.1
Length=1446
Score E
Sequences producing significant alignments: (Bits) Value
seq7 116 3e-23
>seq7
Length=151357931
Score = 116 bits (128), Expect = 3e-23
Identities = 405/626 (65%), Gaps = 17/626 (3%)
Strand=Plus/Minus
Query 589 GATTGTGCCTCTCACGGTGTCTGCATGCATGTGCGCTCTTTACTCAAAGCTGCGTTCCAT 648
|||||| || ||||| || ||||||| |||| || |||||| ||||| |||| |||
Sbjct 72527043 GATTGTCCCGCTCACTGTCAATGCATGCGTGTGTGCACTTTACGCAAAGTTGCGCAACAT 72526984
Query 649 CCATCGCACACACGGTCGTCTATCGGCCA----GGTATGCCGCTGCTCCTCATTACAATA 704
||||| | | || | | | | || |||| | || |||| ||||| | |
Sbjct 72526983 ACATCGTGCTTATGG----CAAGCAGGCAACACGGTACCCAACTCCTCCGCATTATACGA 72526928
Query 705 AGGACATCGAATTACCTCTACCTCTTGCTGTTGCTATACAGGAATTTGGAATTTTCAAAA 764
|||| | || | || || ||||| || | ||||| || || || || || | |
Sbjct 72526927 AGGAAGTGGAGCTTCCCCTCCCTCTAGCGATAGCTATCCAAGATTTCGGTTCATTTCAGA 72526868
Query 765 CTGAAAGTATG--ATCCAAAACCGAATCATGGCACCAACATACCCTGAGGCCACTCAGTA 822
|| |||| | | |||| | ||| ||| |||||| || || || || || | |
Sbjct 72526867 CTTCAAGTCTAGAAACCAATTAC--ATCCTGGTACCAACCTATCCAGAAGCAACAGGGCA 72526810
Query 823 TGAAGGACGTGCTCAAGATAACTTCAACATCACGGACTATCAGACTTACATCCCGACCTT 882
||||| || ||| | | | | ||||||||||| || || || | ||||| || |||||
Sbjct 72526809 CGAAGGCCGCGCTGATGCTGATTTCAACATCACCGATTACCAATCATACATTCCAACCTT 72526750
Query 883 TAAGGACCTCGGAATTCCTTGCAAATCCGTTGATCCCCATATAAAGTCTGGATCCGCTTG 942
||||| || || || || || || | || || || | ||| ||| | || ||
Sbjct 72526749 CAAGGATCTGGGCATCCCGTGTAAGACGGTCGACCCGTTCGTGAAGAAAGGAACGGCATG 72526690
Query 943 GTGGACTTA-CAAGCTCAACAATGCCCATGGCACTACCGATCTTGTCTGTACTATCCCAC 1001
||||||||| |||| |||| || | || |||||||||||||| || || | |||| |
Sbjct 72526689 GTGGACTTATCAAG-TCAATAACTCTCACGGCACTACCGATCTGGTTTGCATCCTCCCGC 72526631
Query 1002 CAACCAACTACTCCGATCTTGGTGTTGCGCTGCGCTCACTATTTCTGGCTACTGCTGCTG 1061
| | ||| || ||| | || | || || || || | ||||| |
Sbjct 72526630 CCTCGCTGTACACCCCGCTTTCGGCTGAAGTCCGTTCGCTTTTCTTAGCTACGAAGCCAA 72526571
Query 1062 ACTCTGACGAATGTTCAGAAATCATCGCCTGGCCCGAGGGCACTGCCG---ACTTTGGCA 1118
| || || |||||||| || ||||| | | ||| || |||| | |||||
Sbjct 72526570 ATTCAGATGAATGTTCGGACATCATATCTTTTACCGGATACAACGCCGTTAATTTTGGAG 72526511
Query 1119 CCAATCTCCGCGAGAACCCACCCAACTCCAACATCCGCGCATTTCTTGCCTTATGCCACG 1178
| ||||||||| || ||||| |||| | ||| | || || || || |||||
Sbjct 72526510 TTCGTTTCCGCGAGATACCTCCCAATACCAATGTTCGCACTTTCCTCGCGCTAGCCCACG 72526451
Query 1179 GACCTCTAGAAGAATGGAGCAATGGA 1204
| || | |||||||||||||| |||
Sbjct 72526450 GGCCGATCGAAGAATGGAGCAACGGA 72526425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4517833889664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |