Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_010348.1 Length=1446 Score E Sequences producing significant alignments: (Bits) Value seq7 116 3e-23 >seq7 Length=151357931 Score = 116 bits (128), Expect = 3e-23 Identities = 405/626 (65%), Gaps = 17/626 (3%) Strand=Plus/Minus Query 589 GATTGTGCCTCTCACGGTGTCTGCATGCATGTGCGCTCTTTACTCAAAGCTGCGTTCCAT 648 |||||| || ||||| || ||||||| |||| || |||||| ||||| |||| ||| Sbjct 72527043 GATTGTCCCGCTCACTGTCAATGCATGCGTGTGTGCACTTTACGCAAAGTTGCGCAACAT 72526984 Query 649 CCATCGCACACACGGTCGTCTATCGGCCA----GGTATGCCGCTGCTCCTCATTACAATA 704 ||||| | | || | | | | || |||| | || |||| ||||| | | Sbjct 72526983 ACATCGTGCTTATGG----CAAGCAGGCAACACGGTACCCAACTCCTCCGCATTATACGA 72526928 Query 705 AGGACATCGAATTACCTCTACCTCTTGCTGTTGCTATACAGGAATTTGGAATTTTCAAAA 764 |||| | || | || || ||||| || | ||||| || || || || || | | Sbjct 72526927 AGGAAGTGGAGCTTCCCCTCCCTCTAGCGATAGCTATCCAAGATTTCGGTTCATTTCAGA 72526868 Query 765 CTGAAAGTATG--ATCCAAAACCGAATCATGGCACCAACATACCCTGAGGCCACTCAGTA 822 || |||| | | |||| | ||| ||| |||||| || || || || || | | Sbjct 72526867 CTTCAAGTCTAGAAACCAATTAC--ATCCTGGTACCAACCTATCCAGAAGCAACAGGGCA 72526810 Query 823 TGAAGGACGTGCTCAAGATAACTTCAACATCACGGACTATCAGACTTACATCCCGACCTT 882 ||||| || ||| | | | | ||||||||||| || || || | ||||| || ||||| Sbjct 72526809 CGAAGGCCGCGCTGATGCTGATTTCAACATCACCGATTACCAATCATACATTCCAACCTT 72526750 Query 883 TAAGGACCTCGGAATTCCTTGCAAATCCGTTGATCCCCATATAAAGTCTGGATCCGCTTG 942 ||||| || || || || || || | || || || | ||| ||| | || || Sbjct 72526749 CAAGGATCTGGGCATCCCGTGTAAGACGGTCGACCCGTTCGTGAAGAAAGGAACGGCATG 72526690 Query 943 GTGGACTTA-CAAGCTCAACAATGCCCATGGCACTACCGATCTTGTCTGTACTATCCCAC 1001 ||||||||| |||| |||| || | || |||||||||||||| || || | |||| | Sbjct 72526689 GTGGACTTATCAAG-TCAATAACTCTCACGGCACTACCGATCTGGTTTGCATCCTCCCGC 72526631 Query 1002 CAACCAACTACTCCGATCTTGGTGTTGCGCTGCGCTCACTATTTCTGGCTACTGCTGCTG 1061 | | ||| || ||| | || | || || || || | ||||| | Sbjct 72526630 CCTCGCTGTACACCCCGCTTTCGGCTGAAGTCCGTTCGCTTTTCTTAGCTACGAAGCCAA 72526571 Query 1062 ACTCTGACGAATGTTCAGAAATCATCGCCTGGCCCGAGGGCACTGCCG---ACTTTGGCA 1118 | || || |||||||| || ||||| | | ||| || |||| | ||||| Sbjct 72526570 ATTCAGATGAATGTTCGGACATCATATCTTTTACCGGATACAACGCCGTTAATTTTGGAG 72526511 Query 1119 CCAATCTCCGCGAGAACCCACCCAACTCCAACATCCGCGCATTTCTTGCCTTATGCCACG 1178 | ||||||||| || ||||| |||| | ||| | || || || || ||||| Sbjct 72526510 TTCGTTTCCGCGAGATACCTCCCAATACCAATGTTCGCACTTTCCTCGCGCTAGCCCACG 72526451 Query 1179 GACCTCTAGAAGAATGGAGCAATGGA 1204 | || | |||||||||||||| ||| Sbjct 72526450 GGCCGATCGAAGAATGGAGCAACGGA 72526425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4517833889664