Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_014593.1 Length=3431 Score E Sequences producing significant alignments: (Bits) Value seq137102 95.1 3e-16 >seq137102 Length=52106 Score = 95.1 bits (104), Expect = 3e-16 Identities = 197/291 (68%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 2508 TGGGTTCAATTTGAAGGGGAGATAATCATTGATGAGGCTATGGGATTATCGCATAGATGG 2567 |||||| ||||||||| || | |||||||||||| ||| || || ||| | ||| Sbjct 2319 TGGGTTGAATTTGAAGATGAAGTCATCATTGATGAGCGTATTGGTAGGTCTCATCGTTGG 2378 Query 2568 GAATATAGATTTCAAGGA-AAGCCAAAGTTCTTAGCTAATTATTGGTTACCAGATGGAAG 2626 |||| ||||| | | ||||||| ||||||| | || ||||| ||| |||| Sbjct 2379 AGGTATA-ATTTCTATAAGAAGCCAATGTTCTTATCCTGCTACTGGTTGCCATCTGGAGT 2437 Query 2627 GAGTATTAGGCCTGCAACGGATTCGCTAGAAAGATTGCTTTACCCAGAGGGATTGCATCA 2686 ||| || || || | ||| || || | ||||| | |||||||| | || Sbjct 2438 TCCTATAAGACCAGCTAAAGATAATCTGGAGAAATTGCAATTCCCAGAGGCGATCCACAG 2497 Query 2687 AACTATAGAAGATTACGAGATGGCGGTACTGGCTATGGTCGTTGATAATCCATGGAACTC 2746 | || ||||| || ||| |||| || ||| |||||||||||||||| | ||| Sbjct 2498 TTCAATTGAAGACTATGAGGCGGCGATATTGGGCATGGTCGTTGATAATCTCTTCAACCA 2557 Query 2747 ACATAACGTAAACCATATGATGCACAGGTTTTGTATTGTTCAGCAGATCAA 2797 ||||| | |||||| | | |||||||| | || | |||||||| || Sbjct 2558 TCATAATATCAACCATCTCAAACACAGGTTCTTAATCATACAGCAGATTAA 2608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10849472149860