Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010-
01-28] 5,379 sequences; 6,149,411 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1964 237 2e-60
seq1962 237 2e-60
seq1951 237 2e-60
seq4001 196 7e-48
>seq1964
Length=3952
Score = 237 bits (262), Expect = 2e-60
Identities = 195/230 (85%), Gaps = 7/230 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| |
Sbjct 2744 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 2801
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| |||| || |||| |||| ||||||||||||||||||| | ||||| ||||
Sbjct 2802 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 2861
Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| |||| | | | ||| ||| || ||||||| ||||||||||||||||||||
Sbjct 2862 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 2918
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2919 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 2968
>seq1962
Length=3709
Score = 237 bits (262), Expect = 2e-60
Identities = 195/230 (85%), Gaps = 7/230 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| |
Sbjct 1442 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 1499
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| |||| || |||| |||| ||||||||||||||||||| | ||||| ||||
Sbjct 1500 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 1559
Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| |||| | | | ||| ||| || ||||||| ||||||||||||||||||||
Sbjct 1560 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 1616
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1617 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 1666
>seq1951
Length=5107
Score = 237 bits (262), Expect = 2e-60
Identities = 195/230 (85%), Gaps = 7/230 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| |
Sbjct 735 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 678
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| |||| || |||| |||| ||||||||||||||||||| | ||||| ||||
Sbjct 677 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 618
Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| |||| | | | ||| ||| || ||||||| ||||||||||||||||||||
Sbjct 617 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 561
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 560 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 511
>seq4001
Length=1413
Score = 196 bits (216), Expect = 7e-48
Identities = 171/205 (83%), Gaps = 7/205 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| |
Sbjct 1214 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 1271
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| |||| || |||| |||| ||||||||||||||||||| | ||||| ||||
Sbjct 1272 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 1331
Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| |||| | | | ||| ||| || ||||||| ||||||||||||||||||||
Sbjct 1332 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 1388
Query 179 GGCCCAGAACATCTAAGGGCATCAC 203
|||||||||||||||||||||||||
Sbjct 1389 GGCCCAGAACATCTAAGGGCATCAC 1413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751960813985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |