Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1964 237 2e-60 seq1962 237 2e-60 seq1951 237 2e-60 seq4001 196 7e-48 >seq1964 Length=3952 Score = 237 bits (262), Expect = 2e-60 Identities = 195/230 (85%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| | Sbjct 2744 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 2801 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| || |||| |||| ||||||||||||||||||| | ||||| |||| Sbjct 2802 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 2861 Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| |||| | | | ||| ||| || ||||||| |||||||||||||||||||| Sbjct 2862 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 2918 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2919 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 2968 >seq1962 Length=3709 Score = 237 bits (262), Expect = 2e-60 Identities = 195/230 (85%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| | Sbjct 1442 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 1499 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| || |||| |||| ||||||||||||||||||| | ||||| |||| Sbjct 1500 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 1559 Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| |||| | | | ||| ||| || ||||||| |||||||||||||||||||| Sbjct 1560 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 1616 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1617 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 1666 >seq1951 Length=5107 Score = 237 bits (262), Expect = 2e-60 Identities = 195/230 (85%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| | Sbjct 735 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 678 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| || |||| |||| ||||||||||||||||||| | ||||| |||| Sbjct 677 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 618 Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| |||| | | | ||| ||| || ||||||| |||||||||||||||||||| Sbjct 617 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 561 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 560 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 511 >seq4001 Length=1413 Score = 196 bits (216), Expect = 7e-48 Identities = 171/205 (83%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | | |||| |||||| |||||||||||||||| | Sbjct 1214 GTACAAAGGGCAGGGACATAATCAGCACAAGCTA-ATGACTTGCGCTTACTAGGAATT-C 1271 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| || |||| |||| ||||||||||||||||||| | ||||| |||| Sbjct 1272 CTCGTTCAAGATGAATAATTACAATCATCTATCCCCATCACGATGCATACTCAAAAGATT 1331 Query 120 ACCCGGACCT-GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| |||| | | | ||| ||| || ||||||| |||||||||||||||||||| Sbjct 1332 ACCCA-ACCTCGCCAGATCAGGAAATA--CTTGTTGAATGCATCAGTGTAGCGCGCGTGC 1388 Query 179 GGCCCAGAACATCTAAGGGCATCAC 203 ||||||||||||||||||||||||| Sbjct 1389 GGCCCAGAACATCTAAGGGCATCAC 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751960813985