Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1964 134 8e-30 seq1962 134 8e-30 seq1951 134 8e-30 seq3378 80.6 1e-13 >seq1964 Length=3952 Score = 134 bits (148), Expect = 8e-30 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||||||||||||||||| |||||||| || ||| || | ||| | ||| | | Sbjct 3271 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAAGAGGCATATATG-TGACAACTTC 3329 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 3330 CAATCTCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3387 >seq1962 Length=3709 Score = 134 bits (148), Expect = 8e-30 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||||||||||||||||| |||||||| || ||| || | ||| | ||| | | Sbjct 1969 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAAGAGGCATATATG-TGACAACTTC 2027 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 2028 CAATCTCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2085 >seq1951 Length=5107 Score = 134 bits (148), Expect = 8e-30 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||||||||||||||||| |||||||| || ||| || | ||| | ||| | | Sbjct 208 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAAGAGGCATATATG-TGACAACTTC 150 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 149 CAATCTCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 92 >seq3378 Length=1228 Score = 80.6 bits (88), Expect = 1e-13 Identities = 84/108 (78%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCCCGATC 64 |||| ||||||||||||| ||||||| || ||| || | ||| | || | ||| Sbjct 20 CAAATACTTTGATTTCTCATAAGGTGGTGAAAGAGGCATATATG-TGGCAATTTCTAATC 78 Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112 ||||||||||| |||| |||||||||||||| ||||||||||||| Sbjct 79 GCTAGTCGGCATCATTTATGGTTAAGACTACGATTGTATCTGATCGTC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278385960810