Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1964 174 3e-41 seq1962 165 1e-38 seq3378 140 6e-31 seq1951 98.7 2e-18 >seq1964 Length=3952 Score = 174 bits (192), Expect = 3e-41 Identities = 190/246 (77%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG--CTCGAATACATTAGCATGG 132 |||||||||| ||| ||||||||| |||||||| || || |||||| ||||||| Sbjct 3630 TTACTTTGAATAAACTAGAGTGTTTCAAGCAGGCATTACGCCTTGAATACTCCAGCATGG 3571 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||| | | || || | |||||| | ||||||||| | || || |||||||||| Sbjct 3570 AATAACAAATGAGAAC-TCAGGTTCT-TCTTGTTGGTT-CAAGAGCCAGAGTAATGATTA 3514 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| | | ||||||||||||||| ||||| Sbjct 3513 ATAGGGACAGTTGGGGGCATTCGTATTTGGTAGCTAGAGGTGAAATTCTTAGATTTGCCA 3454 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| | ||| | |||||||||||||||| |||||||||| Sbjct 3453 AAGACGAACTACTGCGAAAGCATCTGCCAGGAATGTTTTCATTAATCA-AGAACGAAAGT 3395 Query 313 TAGGGG 318 |||||| Sbjct 3394 TAGGGG 3389 >seq1962 Length=3709 Score = 165 bits (182), Expect = 1e-38 Identities = 188/246 (76%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG--CTCGAATACATTAGCATGG 132 |||||||||| ||| ||||||||| |||||||| || || |||||| ||||||| Sbjct 2328 TTACTTTGAATAAACTAGAGTGTTTCAAGCAGGCATTACGCCTTGAATACTCCAGCATGG 2269 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||| | | || || | ||||| | ||||||||| | || | |||||||||| Sbjct 2268 AATAACAAATGAGAAC-TCAAGTTCT-TCTTGTTGGTT-CAAGAGCATGAGTAATGATTA 2212 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| | | ||||||||||||||| ||||| Sbjct 2211 ATAGGGACAGTTGGGGGCATTCGTATTTGGTAGCTAGAGGTGAAATTCTTAGATTTGCCA 2152 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| | ||| | |||||||||||||||| |||||||||| Sbjct 2151 AAGACGAACTACTGCGAAAGCATCTGCCAGGAATGTTTTCATTAATCA-AGAACGAAAGT 2093 Query 313 TAGGGG 318 |||||| Sbjct 2092 TAGGGG 2087 >seq3378 Length=1228 Score = 140 bits (154), Expect = 6e-31 Identities = 182/244 (75%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT-TGC-TCGAATACATTAGCATGGA 133 ||| ||||| || ||||||||| || ||||| || ||| | |||||| |||||||| Sbjct 373 TACATTGAATGAACTAGAGTGTTTCAACCAGGCATTATGCCTTGAATACTCCAGCATGGA 314 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | || || | |||||| | |||||||||| | | | | || |||||||| Sbjct 313 ATAACAAATGAGAAC-TCAGGTTCT-TCTTGTTGGTTTATGAGCCAGA-GTGATGATTAA 257 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||| | ||| | || || | | ||||||| ||||||| ||||| | Sbjct 256 TAGGGACAGTTGAGGGCATTCGTGTTTGGTAGCTAGAGGTGGAATTCTTAGATTTGCCAA 197 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||||||||||||||| | ||| | ||| |||||||||||| | |||||||||| Sbjct 196 AGACGAACTACTGCGAAAGCATCTGCCAGGAATGGTTTCATTAATCAAT-AACGAAAGTT 138 Query 314 AGGG 317 |||| Sbjct 137 AGGG 134 >seq1951 Length=5107 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||||||||||||||| ||||| ||||| ||||||||||||||| | ||| | ||| Sbjct 1 AGAGGTGAAATTCTTAGATTTGCCAAAGACGAACTACTGCGAAAGCATCTGCCAGGAATG 60 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||||||||||||||| Sbjct 61 TTTTCATTAATCA-AGAACGAAAGTTAGGGG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915150771392