Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1951 172 2e-40 >seq1951 Length=5107 Score = 172 bits (190), Expect = 2e-40 Identities = 209/280 (75%), Gaps = 26/280 (9%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA-TGCGAGTGTTTGGGTGTCAAAC 466 ||||||||| |||||||||||||||||||| | || | ||| |||| |||||||||| Sbjct 1887 CCCGTCTTGAAACACGGACCAAGGAGTCTATC-TCAAGTGCAAGTGCAAAGGTGTCAAAC 1945 Query 467 CCGTGCGCGTAATGAAAGTGAACGG---AGGTGGGAACCCGTGAGGGTGCACCATCGACC 523 | ||||| || |||||| ||| | || |||| | || |||| | ||| Sbjct 1946 CTACGCGCGAAACGAAAGT-AACTGTCAAGATGGGTAACC-------TGCA---TTGAC- 1993 Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 |||| | | | | || | ||||||| | | ||||||||||| ||| Sbjct 1994 -ATCCAGCTACCA--------AGCTGCGATAGAGCATTTGGGATAGGACCCGAAAGGTGG 2044 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||||||| ||||| |||||||||| |||||||||||||| |||||||||| |||| | | Sbjct 2045 TGAACTATACCTGAGTAGGGTGAAGTCAGAGGAAACTCTGATGGAGGCTCGTAGCGATAC 2104 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||| |||||||| |||||||||||||||| Sbjct 2105 TGACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 2144 Score = 141 bits (156), Expect = 4e-31 Identities = 127/158 (80%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||| | || ||| |||| |||| | |||| ||| ||||||||||||| Sbjct 1520 GAGTCGCGTTTCTTGCAATTGAAGCGCTAAGTGGGTGATAAACTTCATCTAAAGCTAAAT 1579 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || |||| ||||||| ||||||||| |||| ||||||||||||| ||| ||||| Sbjct 1580 ATCAGCAAGAGTCCGATAGAGCACAAGTACCGTGAGGGAAAGATGAAAAGAACTCTGGAA 1639 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 |||||||||||| | || |||||||| | | ||| ||| Sbjct 1640 AGAGAGTTAAAAGGAAC-TGAAATTGCTAAGAGGAAAG 1676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079884620450