Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1964 315 1e-83 seq1962 315 1e-83 seq1951 315 1e-83 seq4001 78.8 1e-12 >seq1964 Length=3952 Score = 315 bits (348), Expect = 1e-83 Identities = 220/245 (90%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2901 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTT 2960 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGCCACCAACCATAGTC 134 |||||||| | | | | | | |||||||||||||||| |||||| | || ||| | Sbjct 2961 AAACTTCCTTACGTTAAACACGTAAAGTCCCTCTAAGAAGCGCAGCCAA-AGCCGTAG-C 3018 Query 135 GATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 ||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 3019 TTTGGTGTCTATTTAGCAGGTTAAAGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 3078 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3079 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 3138 Query 254 CTGTC 258 ||||| Sbjct 3139 CTGTC 3143 >seq1962 Length=3709 Score = 315 bits (348), Expect = 1e-83 Identities = 220/245 (90%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1599 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTT 1658 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGCCACCAACCATAGTC 134 |||||||| | | | | | | |||||||||||||||| |||||| | || ||| | Sbjct 1659 AAACTTCCTTACGTTAAACACGTAAAGTCCCTCTAAGAAGCGCAGCCAA-AGCCGTAG-C 1716 Query 135 GATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 ||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1717 TTTGGTGTCTATTTAGCAGGTTAAAGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 1776 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1777 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 1836 Query 254 CTGTC 258 ||||| Sbjct 1837 CTGTC 1841 >seq1951 Length=5107 Score = 315 bits (348), Expect = 1e-83 Identities = 220/245 (90%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 578 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTT 519 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGCCACCAACCATAGTC 134 |||||||| | | | | | | |||||||||||||||| |||||| | || ||| | Sbjct 518 AAACTTCCTTACGTTAAACACGTAAAGTCCCTCTAAGAAGCGCAGCCAA-AGCCGTAG-C 461 Query 135 GATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 ||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 460 TTTGGTGTCTATTTAGCAGGTTAAAGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 401 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 400 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 341 Query 254 CTGTC 258 ||||| Sbjct 340 CTGTC 336 >seq4001 Length=1413 Score = 78.8 bits (86), Expect = 1e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 58 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1371 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796758479499