Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2094 327 2e-87 seq3365 291 1e-76 seq2131 262 7e-68 seq1951 262 7e-68 seq4343 188 1e-45 seq2053 87.8 3e-15 >seq2094 Length=2850 Score = 327 bits (362), Expect = 2e-87 Identities = 233/265 (88%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT- 89 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1615 TCATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 1674 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TGATAGGAAGAGCC 148 |||| ||||||||||||| || ||| || |||||| || | |||||||||||||| Sbjct 1675 ATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATGATAGGAAGAGCC 1734 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 1794 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 |||||||||||||||||||||||||||||| || ||| | |||||||||||||| Sbjct 1795 CCCTGTGGTAACTTTTCTGGCACCTCTAGCTGAAAGCTTCTCAGATCTAAAGGATCGATA 1854 Query 269 GGCCACACTTTCATGGTTTGTATTC 293 ||||| ||||| |||||||||| Sbjct 1855 GGCCATGCTTTCGCAGTTTGTATTC 1879 >seq3365 Length=1387 Score = 291 bits (322), Expect = 1e-76 Identities = 192/210 (91%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT- 89 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1160 TCATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 1219 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TGATAGGAAGAGCC 148 |||| ||||||||||||| || ||| || |||||| || | |||||||||||||| Sbjct 1220 ATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATGATAGGAAGAGCC 1279 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1280 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 1339 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||| |||||||| Sbjct 1340 CCCTGTGGTAACTTTTCTGGCCCCTCTAGC 1369 >seq2131 Length=2211 Score = 262 bits (290), Expect = 7e-68 Identities = 176/194 (91%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT- 89 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1044 TCATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 1103 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TGATAGGAAGAGCC 148 |||| ||||||||||||| || ||| || |||||| || | |||||||||||||| Sbjct 1104 ATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATGATAGGAAGAGCC 1163 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1164 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 1223 Query 209 CCCTGTGGTAACTT 222 ||||||||||| || Sbjct 1224 CCCTGTGGTAATTT 1237 Score = 91.5 bits (100), Expect = 3e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||||||||||||||||||||||||||||||| || ||| | ||||||||||| Sbjct 375 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTGAAAGCTTCTCAGATCTAAAGGATCG 434 Query 266 ATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| ||||| |||||||||| Sbjct 435 ATAGGCCATGCTTTCGCAGTTTGTATTC 462 Score = 91.5 bits (100), Expect = 3e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||||||||||||||||||||||||||||||| || ||| | ||||||||||| Sbjct 1674 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTGAAAGCTTCTCAGATCTAAAGGATCG 1733 Query 266 ATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| ||||| |||||||||| Sbjct 1734 ATAGGCCATGCTTTCGCAGTTTGTATTC 1761 >seq1951 Length=5107 Score = 262 bits (290), Expect = 7e-68 Identities = 176/194 (91%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT- 89 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4631 TCATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 4572 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TGATAGGAAGAGCC 148 |||| ||||||||||||| || ||| || |||||| || | |||||||||||||| Sbjct 4571 ATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATGATAGGAAGAGCC 4512 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4511 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 4452 Query 209 CCCTGTGGTAACTT 222 ||||||||||| || Sbjct 4451 CCCTGTGGTAATTT 4438 Score = 89.7 bits (98), Expect = 9e-16 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||| || ||| | |||||||||||| Sbjct 4002 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTGAAAGCTTCTCAGATCTAAAGGATCGA 3943 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| ||||| |||||||||| Sbjct 3942 TAGGCCATGCTTTCGCAGTTTGTATTC 3916 >seq4343 Length=1078 Score = 188 bits (208), Expect = 1e-45 Identities = 131/146 (90%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 79 TCACGTTCCCT-ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TG 136 ||||||||||| |||| ||||||||||||| || ||| || |||||| || | || Sbjct 587 TCACGTTCCCTGATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATG 528 Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 468 Query 197 CAAGCCAGTTATCCCTGTGGTAACTT 222 ||||||||||||||||||||||| || Sbjct 467 CAAGCCAGTTATCCCTGTGGTAATTT 442 Score = 82.4 bits (90), Expect = 1e-13 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 175 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1078 CGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTT 1031 >seq2053 Length=2205 Score = 87.8 bits (96), Expect = 3e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGAT 267 ||||||||||||||||||||||||||||||| || ||| | ||||||||||||| Sbjct 1412 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCTGAAAGCTTCTCAGATCTAAAGGATCGAT 1353 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||||| |||||||||| Sbjct 1352 AGGCCATGCTTTCGCAGTTTGTATTC 1327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854354041824