Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1964 77.0 3e-12 seq1962 73.4 4e-11 >seq1964 Length=3952 Score = 77.0 bits (84), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG--CTCGAATACATTACCATGG 71 |||||||||| ||| ||||| ||| |||||||| || || |||||| | ||||| Sbjct 3630 TTACTTTGAATAAACTAGAGTGTTTCAAGCAGGCATTACGCCTTGAATACTCCAGCATGG 3571 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||| | | || || | |||||| | |||| |||| | || | |||||||| Sbjct 3570 AATAACAAATGAGAAC-TCAGGTTCT-TCTTGTTGGTTC--AAGAGCCAGAGTAATGATT 3515 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 |||| ||| ||| ||||| | ||||| | | | ||||||||||||| ||||| Sbjct 3514 AATAGGGACAGTTGGGGGCATTCGTATTTGGTAGCTAGAGGTGAAATTCTTAGATTT 3458 >seq1962 Length=3709 Score = 73.4 bits (80), Expect = 4e-11 Identities = 125/177 (71%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG--CTCGAATACATTACCATGG 71 |||||||||| ||| ||||| ||| |||||||| || || |||||| | ||||| Sbjct 2328 TTACTTTGAATAAACTAGAGTGTTTCAAGCAGGCATTACGCCTTGAATACTCCAGCATGG 2269 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||| | | || || | ||||| | |||| |||| | || | |||||||| Sbjct 2268 AATAACAAATGAGAAC-TCAAGTTCT-TCTTGTTGGTTC--AAGAGCATGAGTAATGATT 2213 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 |||| ||| ||| ||||| | ||||| | | | ||||||||||||| ||||| Sbjct 2212 AATAGGGACAGTTGGGGGCATTCGTATTTGGTAGCTAGAGGTGAAATTCTTAGATTT 2156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511973320160