Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1962 439 7e-121 seq3378 163 9e-38 >seq1962 Length=3709 Score = 439 bits (486), Expect = 7e-121 Identities = 410/510 (80%), Gaps = 16/510 (3%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||| ||| || ||| || ||| || ||||| ||||||||||| Sbjct 2552 ACTCATTCCAATTGCAAAAC---AAATAGTTCTGCATTGATATTTCACGTCACTACCTCA 2608 Query 63 CCGTGTCG---GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | || ||| | |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2609 C-GTTTCGTTCGTATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 2667 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||| Sbjct 2668 TTCTCAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTCAATGCCACGGT 2727 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||||| || |||||| ||||||| ||||||| |||||| || | |||||||||||| || Sbjct 2728 AGGCCAATACCCTACCGTCGAAAGCTGATAGGTCAGAAACTTAAGTGAACCATCGCCAGC 2787 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCA-CCAAGGAGCCCCGAAG--GGCGT 296 | |||||||||||| || |||||||| |||| |||| | | ||| | || Sbjct 2788 -CGTAGCCATGCGATTCACCAACTTATTATGGATCATCCAACAACCATGCAAGCATGGGT 2846 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTAG 354 | ||| | ||||||||| | | | |||| || ||| | || | ||| ||||||| Sbjct 2847 TAGTTCTCAATCTAATAAGTGCCGCTTTTCCGTGAGGTCCAGCGTTAT-GCACGTATTAG 2905 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||| ||||||||||||||||||| |||||||| || ||| ||| ||||||| || Sbjct 2906 CTCCAGAATTACCACGGTTATCCGTGTAGTAA-TTATATTCACGGAAATTATAACTGTTT 2964 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||||||||| ||||| | || |||||||||| |||||||||||| Sbjct 2965 TAATGAGCCATTCGCAGTTTCGTTGTAT-TAAAACTAATACTTAGACTTGCATGGCTTAA 3023 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 3024 TCTTTGAGACAAGCATATGACTACTGGCAG 3053 >seq3378 Length=1228 Score = 163 bits (180), Expect = 9e-38 Identities = 163/209 (78%), Gaps = 7/209 (3%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||| ||| || ||| || ||| || ||||| ||||||||||| Sbjct 593 ACTCATTCCAATTGCAAAAC---AAATAGTTCTGCATTGATATTTCACGTCACTACCTCA 649 Query 63 CCGTGTCGGG---ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | || ||| ||| ||||||||||||| ||||||||||||| |||| ||||||| Sbjct 650 C-GTTTCGTTCATATTAAGTAATTTGCGCGCTTGCTGCCTTCCTTACGTGTGCTAGCCGT 708 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 | || || ||||||||||||||| ||||| ||||||||||| ||||| || ||| ||| Sbjct 709 TCCTTAGAGTCCCTCTCCGGAATCAAACCCCAATTCCCCGTTTCCCGTCAATGCCACGGT 768 Query 180 AGGCCACTATCCTACCATCGAAAGTTGAT 208 |||||| || || ||| ||||||| |||| Sbjct 769 AGGCCAATACCCAACCGTCGAAAGCTGAT 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510318755584