Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3 205 1e-50 seq2 205 1e-50 >seq3 Length=3518759 Score = 205 bits (226), Expect = 1e-50 Identities = 185/228 (81%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 503625 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 503682 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| |||||| ||||||| | | |||||||| Sbjct 503683 CTCGTTCATGATTTAGAATTGCAAAAATCAATCCCCGACACGATGCACACT-AAAGATTA 503741 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| |||| ||| | | ||||| || || |||||||||||||||||||| | Sbjct 503742 CCCAACCCTTTCGGGACAGG--ACAAACTCGATGGATGCATCAGTGTAGCGCGCGTGCAG 503799 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 503800 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 503847 Score = 205 bits (226), Expect = 1e-50 Identities = 185/228 (81%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 614267 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 614324 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| |||||| ||||||| | | |||||||| Sbjct 614325 CTCGTTCATGATTTAGAATTGCAAAAATCAATCCCCGACACGATGCACACT-AAAGATTA 614383 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| |||| ||| | | ||||| || || |||||||||||||||||||| | Sbjct 614384 CCCAACCCTTTCGGGACAGG--ACAAACTCGATGGATGCATCAGTGTAGCGCGCGTGCAG 614441 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 614442 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 614489 >seq2 Length=2823968 Score = 205 bits (226), Expect = 1e-50 Identities = 185/228 (81%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 1830177 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 1830120 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| |||||| ||||||| | | |||||||| Sbjct 1830119 CTCGTTCATGATTTAGAATTGCAAAAATCAATCCCCGACACGATGCACACT-AAAGATTA 1830061 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| |||| ||| | | ||||| || || |||||||||||||||||||| | Sbjct 1830060 CCCAACCCTTTCGGGACAGG--ACAAACTCGATGGATGCATCAGTGTAGCGCGCGTGCAG 1830003 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 1830002 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCC 1829955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996481345