Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3 138 6e-31 seq2 138 6e-31 >seq3 Length=3518759 Score = 138 bits (152), Expect = 6e-31 Identities = 103/119 (87%), Gaps = 5/119 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC--AAAATGATAACATCGC 58 ||||||||||||||||||||||| ||||||| || ||||| ||||||| || || Sbjct 504150 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGGAAAATGACGACCTC-- 504207 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 504208 -CAATCCCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 504265 Score = 138 bits (152), Expect = 6e-31 Identities = 103/119 (87%), Gaps = 5/119 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC--AAAATGATAACATCGC 58 ||||||||||||||||||||||| ||||||| || ||||| ||||||| || || Sbjct 614792 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGGAAAATGACGACCTC-- 614849 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 614850 -CAATCCCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 614907 >seq2 Length=2823968 Score = 138 bits (152), Expect = 6e-31 Identities = 103/119 (87%), Gaps = 5/119 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC--AAAATGATAACATCGC 58 ||||||||||||||||||||||| ||||||| || ||||| ||||||| || || Sbjct 1829652 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGGAAAATGACGACCTC-- 1829595 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1829594 -CAATCCCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 1829537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398739370