Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3 248 2e-63 seq2 248 2e-63 >seq3 Length=3518759 Score = 248 bits (274), Expect = 2e-63 Identities = 206/247 (83%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTAGCATG 131 ||||||||||| |||||||||||||| |||||| | |||| || |||||| | |||||| Sbjct 504509 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 504450 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||| |||||| | |||||||||||||||||||| || || |||||| || Sbjct 504449 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAG--CCTTGGTAATGGTT 504393 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 504392 AATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 504333 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||| ||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 504332 AAAGACGAACCACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 504274 Query 312 TTAGGGG 318 ||||||| Sbjct 504273 TTAGGGG 504267 Score = 248 bits (274), Expect = 2e-63 Identities = 206/247 (83%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTAGCATG 131 ||||||||||| |||||||||||||| |||||| | |||| || |||||| | |||||| Sbjct 615151 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 615092 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||| |||||| | |||||||||||||||||||| || || |||||| || Sbjct 615091 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAG--CCTTGGTAATGGTT 615035 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 615034 AATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 614975 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||| ||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 614974 AAAGACGAACCACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 614916 Query 312 TTAGGGG 318 ||||||| Sbjct 614915 TTAGGGG 614909 >seq2 Length=2823968 Score = 248 bits (274), Expect = 2e-63 Identities = 206/247 (83%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTAGCATG 131 ||||||||||| |||||||||||||| |||||| | |||| || |||||| | |||||| Sbjct 1829293 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 1829352 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||| |||||| | |||||||||||||||||||| || || |||||| || Sbjct 1829353 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAG--CCTTGGTAATGGTT 1829409 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 1829410 AATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 1829469 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||| ||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 1829470 AAAGACGAACCACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 1829528 Query 312 TTAGGGG 318 ||||||| Sbjct 1829529 TTAGGGG 1829535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195579584