Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3 365 8e-99 seq2 361 9e-98 >seq3 Length=3518759 Score = 365 bits (404), Expect = 8e-99 Identities = 257/292 (88%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||||| | | |||| | ||||||||||||||||||||||||||||||| Sbjct 499731 TACTAGGTGGAATTACTGTCGCGGCG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 499789 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 499790 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 499849 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 499850 CTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 499909 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 499910 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTGGCCG 499969 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||| ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 499970 CAATGCTCGCGGGCTCAAAGGATCGATAGGCCATGCTTACACAGTTTGTATT 500021 Score = 365 bits (404), Expect = 8e-99 Identities = 257/292 (88%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||||| | | |||| | ||||||||||||||||||||||||||||||| Sbjct 610371 TACTAGGTGGAATTACTGTCGCGGCG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 610429 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 610430 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 610489 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610490 CTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 610549 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 610550 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTGGCCG 610609 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||| ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 610610 CAATGCTCGCGGGCTCAAAGGATCGATAGGCCATGCTTACACAGTTTGTATT 610661 >seq2 Length=2823968 Score = 361 bits (400), Expect = 9e-98 Identities = 256/292 (88%), Gaps = 1/292 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||||| | | |||| | ||||||||||||||||| ||||||||||||| Sbjct 1834089 TACTAGGTGGAATTACTGTCGCGGCG-CAGTCATCAGTAGGGTAAAGCTAACCTGTCTCA 1834031 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 1834030 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 1833971 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1833970 CTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1833911 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 1833910 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTGGCCG 1833851 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||| ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 1833850 CAATGCTCGCGGGCTCAAAGGATCGATAGGCCATGCTTACACAGTTTGTATT 1833799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395873248