Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-19 seq2 100 3e-19 >seq3 Length=3518759 Score = 100 bits (110), Expect = 3e-19 Identities = 86/104 (83%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 || |||||||||||||||| || | |||||| |||||||||||||||| | |||||| Sbjct 504407 CTCGAAACCAACAAAATAGA-ACCAAGGTCCTACTCTATTATTCCATGCTGAAGTATTCA 504465 Query 66 GG-CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | | ||| |||||| ||||||||||||||||||| |||||| Sbjct 504466 AGACAAAAGTCTGCTTGAAACACTCTAATTTTCTCAAAGTAAAA 504509 Score = 100 bits (110), Expect = 3e-19 Identities = 86/104 (83%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 || |||||||||||||||| || | |||||| |||||||||||||||| | |||||| Sbjct 615049 CTCGAAACCAACAAAATAGA-ACCAAGGTCCTACTCTATTATTCCATGCTGAAGTATTCA 615107 Query 66 GG-CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | | ||| |||||| ||||||||||||||||||| |||||| Sbjct 615108 AGACAAAAGTCTGCTTGAAACACTCTAATTTTCTCAAAGTAAAA 615151 >seq2 Length=2823968 Score = 100 bits (110), Expect = 3e-19 Identities = 86/104 (83%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 || |||||||||||||||| || | |||||| |||||||||||||||| | |||||| Sbjct 1829395 CTCGAAACCAACAAAATAGA-ACCAAGGTCCTACTCTATTATTCCATGCTGAAGTATTCA 1829337 Query 66 GG-CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | | ||| |||||| ||||||||||||||||||| |||||| Sbjct 1829336 AGACAAAAGTCTGCTTGAAACACTCTAATTTTCTCAAAGTAAAA 1829293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197215022