Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-30 seq2 138 1e-30 >seq3 Length=3518759 Score = 138 bits (152), Expect = 1e-30 Identities = 141/181 (78%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAATACATTACCATG 70 ||||||||||| |||||||||| ||| |||||| | |||| || |||||| | | |||| Sbjct 504509 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 504450 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||||| |||||| | ||||||||||||| |||||| || | |||||| | Sbjct 504449 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAGCCTTG---GTAATGGT 504394 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| | | || ||||| | ||||| || ||||| ||||||||||||| ||||| | Sbjct 504393 TAATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGT 504334 Query 191 T 191 | Sbjct 504333 T 504333 Score = 138 bits (152), Expect = 1e-30 Identities = 141/181 (78%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAATACATTACCATG 70 ||||||||||| |||||||||| ||| |||||| | |||| || |||||| | | |||| Sbjct 615151 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 615092 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||||| |||||| | ||||||||||||| |||||| || | |||||| | Sbjct 615091 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAGCCTTG---GTAATGGT 615036 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| | | || ||||| | ||||| || ||||| ||||||||||||| ||||| | Sbjct 615035 TAATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGT 614976 Query 191 T 191 | Sbjct 614975 T 614975 >seq2 Length=2823968 Score = 138 bits (152), Expect = 1e-30 Identities = 141/181 (78%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAATACATTACCATG 70 ||||||||||| |||||||||| ||| |||||| | |||| || |||||| | | |||| Sbjct 1829293 TTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGACTTTTGTCTTGAATACTTCAGCATG 1829352 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||||| |||||| | ||||||||||||| |||||| || | |||||| | Sbjct 1829353 GAATAATAGAGTAGGACCTT-GGTTCTATTTTGTTGGTTTCGAGCCTTG---GTAATGGT 1829408 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| | | || ||||| | ||||| || ||||| ||||||||||||| ||||| | Sbjct 1829409 TAATAGGAACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGT 1829468 Query 191 T 191 | Sbjct 1829469 T 1829469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997604320