Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-29 seq2 134 2e-29 >seq3 Length=3518759 Score = 134 bits (148), Expect = 2e-29 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| ||| || || |||||| ||||| || ||||| || |||| Sbjct 499733 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGGTTGGCTGACTAGCCAGT 499676 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 499675 GCCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 499618 Score = 134 bits (148), Expect = 2e-29 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| ||| || || |||||| ||||| || ||||| || |||| Sbjct 610373 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGGTTGGCTGACTAGCCAGT 610316 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 610315 GCCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 610258 >seq2 Length=2823968 Score = 134 bits (148), Expect = 2e-29 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| ||| || || |||||| ||||| || ||||| || |||| Sbjct 1834087 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGGTTGGCTGACTAGCCAGT 1834144 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| Sbjct 1834145 GCCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 1834202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196166912