Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3 215 1e-53 seq2 215 1e-53 >seq3 Length=3518759 Score = 215 bits (238), Expect = 1e-53 Identities = 239/312 (77%), Gaps = 9/312 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||| |||| || | || ||| ||||||||| Sbjct 503931 GAACGAGACCTTAACCTGCTAACTAGCT--GCTTGGATTTCGTCCTCGTTTGCTTCTTAG 503874 Query 80 AGGGACTATCG-GCT-CAAGCC-GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||| | ||| ||||| | |||||||| ||||||||||||||||||||||||| Sbjct 503873 AGGGACTCCTGTGCTTCAAGCGTGGGGGAAGTTTAAGGCAATAACAGGTCTGTGATGCCC 503814 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| |||||| |||||||||||||||||| | ||| |||||| | ||| Sbjct 503813 TTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATCCATCGAGTT--TGTCCTGTC 503756 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||| |||||||||| ||| | ||||| |||||| || |||||||| Sbjct 503755 CCGAAAGGGTTGGGTAATCT--TTAGTGTGCATCGTGTCGGGGATTGATTTTTGCAATTC 503698 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 | || | |||||||||||||||||| |||| ||||||||| | | |||||||||| Sbjct 503697 TAAATCATGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCAGATTACGTCC 503638 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 503637 CTGCCCTTTGTA 503626 Score = 215 bits (238), Expect = 1e-53 Identities = 239/312 (77%), Gaps = 9/312 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||| |||| || | || ||| ||||||||| Sbjct 614573 GAACGAGACCTTAACCTGCTAACTAGCT--GCTTGGATTTCGTCCTCGTTTGCTTCTTAG 614516 Query 80 AGGGACTATCG-GCT-CAAGCC-GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||| | ||| ||||| | |||||||| ||||||||||||||||||||||||| Sbjct 614515 AGGGACTCCTGTGCTTCAAGCGTGGGGGAAGTTTAAGGCAATAACAGGTCTGTGATGCCC 614456 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| |||||| |||||||||||||||||| | ||| |||||| | ||| Sbjct 614455 TTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATCCATCGAGTT--TGTCCTGTC 614398 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||| |||||||||| ||| | ||||| |||||| || |||||||| Sbjct 614397 CCGAAAGGGTTGGGTAATCT--TTAGTGTGCATCGTGTCGGGGATTGATTTTTGCAATTC 614340 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 | || | |||||||||||||||||| |||| ||||||||| | | |||||||||| Sbjct 614339 TAAATCATGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCAGATTACGTCC 614280 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 614279 CTGCCCTTTGTA 614268 >seq2 Length=2823968 Score = 215 bits (238), Expect = 1e-53 Identities = 239/312 (77%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||| |||| || | || ||| ||||||||| Sbjct 1829871 GAACGAGACCTTAACCTGCTAACTAGCT--GCTTGGATTTCGTCCTCGTTTGCTTCTTAG 1829928 Query 80 AGGGACTATCG-GCT-CAAGCC-GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||| | ||| ||||| | |||||||| ||||||||||||||||||||||||| Sbjct 1829929 AGGGACTCCTGTGCTTCAAGCGTGGGGGAAGTTTAAGGCAATAACAGGTCTGTGATGCCC 1829988 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||| |||||| |||||||||||||||||| | ||| |||||| | ||| Sbjct 1829989 TTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATCCATCGAGTT--TGTCCTGTC 1830046 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||| |||||||||| ||| | ||||| |||||| || |||||||| Sbjct 1830047 CCGAAAGGGTTGGGTAATCT--TTAGTGTGCATCGTGTCGGGGATTGATTTTTGCAATTC 1830104 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 | || | |||||||||||||||||| |||| ||||||||| | | |||||||||| Sbjct 1830105 TAAATCATGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCAGATTACGTCC 1830164 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 1830165 CTGCCCTTTGTA 1830176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195425024