Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 172 4e-38 >seq5 Length=493739 Score = 172 bits (190), Expect = 4e-38 Identities = 396/585 (68%), Gaps = 16/585 (3%) Strand=Plus/Minus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 |||| || | || || |||| || || || ||||| || || | || || || | || Sbjct 439073 CACATACATAGGCAGCGCAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGT 439014 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGA 66109 |||| || ||||| ||| ||||| || || | ||||| || | || ||||| Sbjct 439013 GTACTGCACGATTTCACAGCAGAGATT--TGAAGACTTGATGGTCCCAAGGTTTTGTTGG 438956 Query 66110 TTACTCTT-GCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||| ||| ||||| ||||| ||||| | |||| ||||||| || || || | || Sbjct 438955 TTCGACTTCGCG-TTGCAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTG 438897 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCC-TACCTT 66227 | || | |||||| ||| || | | || | || | ||| ||| | || Sbjct 438896 GCTCTGGAGTATGGCGAACCAGAGCGACTGGGCAGGGATAGT-CTTACGACCCATGCCG- 438839 Query 66228 TGCGTTC--GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285 || ||| ||| | || || | ||||| || ||||| || ||| | |||| Sbjct 438838 -GCCTTCTCGTACTTGGTATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACC 438780 Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345 | || | | || ||||||| || |||||| || | ||| ||||| ||| || Sbjct 438779 ACGGCATTCATCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGCTTCATGAA 438720 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 |||||||| |||||||| || || || || || ||||| || ||||| |||||| Sbjct 438719 AAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTG 438660 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 ||| |||||||| || | || || | ||| || || ||||| || |||||||| ||||| Sbjct 438659 ATTCTTGCGCAAATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGC 438600 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG--TTGAAG 66523 || |||||| | || || |||||||||||||| |||||||| ||| ||| || || Sbjct 438599 AAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCG--GTTGCATTAAAA 438542 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 | ||||||||| || || | ||||| || || || |||||| Sbjct 438541 ATACGCAACATGGGCACAATACCGTTGCTCTTACCGTTTGTGCCG 438497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565659691120