Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10 194 3e-47 seq9 194 3e-47 >seq10 Length=1797577 Score = 194 bits (214), Expect = 3e-47 Identities = 182/227 (80%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 578289 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 578346 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | | |||||||| |||| ||||| | ||||||| | | | | ||| Sbjct 578347 CTCGTTCATGATCTAGAATTGCAAAGATCAATCCCAAACACGATGCAGACT-AGGGGTTA 578405 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || || ||| |||||| ||| || || || | | |||||||||||||||||||| | Sbjct 578406 CCAGGGCCTATCGGCCGAGGG--TAAACACGAGGCAAGCATCAGTGTAGCGCGCGTGCAG 578463 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct 578464 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACCTC 578510 >seq9 Length=2593320 Score = 194 bits (214), Expect = 3e-47 Identities = 182/227 (80%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 164226 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 164283 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | | |||||||| |||| ||||| | ||||||| | | | | ||| Sbjct 164284 CTCGTTCATGATCTAGAATTGCAAAGATCAATCCCAAACACGATGCAGACT-AGGGGTTA 164342 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || || ||| |||||| ||| || || || | | |||||||||||||||||||| | Sbjct 164343 CCAGGGCCTATCGGCCGAGGG--TAAACACGAGGCAAGCATCAGTGTAGCGCGCGTGCAG 164400 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct 164401 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACCTC 164447 Score = 194 bits (214), Expect = 3e-47 Identities = 182/227 (80%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 293008 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 293065 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | | |||||||| |||| ||||| | ||||||| | | | | ||| Sbjct 293066 CTCGTTCATGATCTAGAATTGCAAAGATCAATCCCAAACACGATGCAGACT-AGGGGTTA 293124 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || || ||| |||||| ||| || || || | | |||||||||||||||||||| | Sbjct 293125 CCAGGGCCTATCGGCCGAGGG--TAAACACGAGGCAAGCATCAGTGTAGCGCGCGTGCAG 293182 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct 293183 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACCTC 293229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999898010