Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq10 123 1e-26 seq9 123 1e-26 >seq10 Length=1797577 Score = 123 bits (136), Expect = 1e-26 Identities = 98/117 (84%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| ||||||| || ||||| | || || | | Sbjct 578814 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGACGGAGTCGAGGCGACGACCAC---C 578870 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 578871 AATCCCTAGTCGGCATAGTTTAAGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 578927 >seq9 Length=2593320 Score = 123 bits (136), Expect = 1e-26 Identities = 98/117 (84%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| ||||||| || ||||| | || || | | Sbjct 293533 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGACGGAGTCGAGGCGACGACCAC---C 293589 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 293590 AATCCCTAGTCGGCATAGTTTAAGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 293646 Score = 120 bits (132), Expect = 2e-25 Identities = 97/117 (83%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| ||||||| || ||||| | || || | | Sbjct 164751 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGACGGAGTCGAGGCGACGACCAC---C 164807 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct 164808 AATCCCTAGTCGGCATGGTTTAAGGTTAGGACTACGACGGTATCTGATCGTCTTCGA 164864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399963460