Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10 132 9e-29 seq9 132 9e-29 >seq10 Length=1797577 Score = 132 bits (146), Expect = 9e-29 Identities = 180/245 (73%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||| ||||||| || || | ||| | ||||||||| Sbjct 579163 TTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGT-TTCGCCTGTATAATTGAGCATGGAA 579105 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTAGGACCGCCGTAATGATTAA 193 ||| || ||| | || || ||||||| || | |||||| |||| Sbjct 579104 TAACCTTGTATGACCC-CTGTCGTACC--GTTGGTTGACTTTGG-----GTAATGGTTAA 579053 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||| | || ||||| | ||| || | ||||||||||||||||||| ||||| | || Sbjct 579052 TAGGAACGGTTGGGGGCATTCGTACTCGACTGTCAGAGGTGAAATTCTTAGATTTGTCGA 578993 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| || ||||||||||| || ||||||| | || ||||||||| ||||||||||| Sbjct 578992 TGACGCACGACTGCGAAAGCATTTGCCAAGGACGCTTCCATTAATCA-AGAACGAAAGTT 578934 Query 314 AGGGG 318 ||||| Sbjct 578933 AGGGG 578929 >seq9 Length=2593320 Score = 132 bits (146), Expect = 9e-29 Identities = 180/245 (73%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||| ||||||| || || | ||| | ||||||||| Sbjct 165099 TTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGT-TTCGCCTGTATAATTGAGCATGGAA 165041 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTAGGACCGCCGTAATGATTAA 193 ||| || ||| | || || ||||||| || | |||||| |||| Sbjct 165040 TAACCTTGTATGACC--CTGTCGTACC--GTTGGTTGACTTTGG-----GTAATGGTTAA 164990 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||| | || ||||| | ||| || | ||||||||||||||||||| ||||| | || Sbjct 164989 TAGGAACGGTTGGGGGCATTCGTACTCGACTGTCAGAGGTGAAATTCTTAGATTTGTCGA 164930 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| || ||||||||||| || ||||||| | || ||||||||| ||||||||||| Sbjct 164929 TGACGCACGACTGCGAAAGCATTTGCCAAGGACGCTTCCATTAATCA-AGAACGAAAGTT 164871 Query 314 AGGGG 318 ||||| Sbjct 164870 AGGGG 164866 Score = 132 bits (146), Expect = 9e-29 Identities = 180/245 (73%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||| ||||||| || || | ||| | ||||||||| Sbjct 293881 TTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGT-TTCGCCTGTATAATTGAGCATGGAA 293823 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTAGGACCGCCGTAATGATTAA 193 ||| || ||| | || || ||||||| || | |||||| |||| Sbjct 293822 TAACCTTGTATGACC--CTGTCGTACC--GTTGGTTGACTTTGG-----GTAATGGTTAA 293772 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||| | || ||||| | ||| || | ||||||||||||||||||| ||||| | || Sbjct 293771 TAGGAACGGTTGGGGGCATTCGTACTCGACTGTCAGAGGTGAAATTCTTAGATTTGTCGA 293712 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| || ||||||||||| || ||||||| | || ||||||||| ||||||||||| Sbjct 293711 TGACGCACGACTGCGAAAGCATTTGCCAAGGACGCTTCCATTAATCA-AGAACGAAAGTT 293653 Query 314 AGGGG 318 ||||| Sbjct 293652 AGGGG 293648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199871872