Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq14 176 1e-41 >seq14 Length=35107 Score = 176 bits (194), Expect = 1e-41 Identities = 252/351 (72%), Gaps = 22/351 (6%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| |||||| || | | || |||||| || ||||||||||| Sbjct 30995 ATCTTCACAGACATTATTATTTCATTGAAATTTTCTTTAAGACAGCGCTCAAATCGTTAC 31054 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 31055 TCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATG 31114 Query 129 GTTACGGCCGCCGTTT-ACTGGGGCT--TAAGTTCACTGCTTCGATTGCTCTAACAG-AT 184 ||| |||||||||| ||| | ||| ||| ||| || | || || | Sbjct 31115 AATACAGCCGCCGTTTAACTAGCGCTTATAAAAACAC-------AT---TATAGTAGTGT 31164 Query 185 CC--CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 || || || | | || || ||||||| ||||| || | |||||| | | | ||| Sbjct 31165 CCTTTTTTTACTTACTAGAACTGGGCAGGAGTCAGTTCTTGTACATCATTATTTAATTTA 31224 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 ||| |||||||||||||| |||||||||| ||| ||||| | | | | | Sbjct 31225 GCAAGAACCTGTGTTTTTGATAAACAGTCGTTTGAGCCTAGTATGT------TACACTTT 31278 Query 303 ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 | | ||| | || |||||||||||| | | |||||||| |||||||||| Sbjct 31279 AAAAGCATTCTTTATCCCTAAGTTACAGAATAATTTTGCCTAGTTCCTTAA 31329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399851264