Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10 257 3e-66 seq9 257 3e-66 >seq10 Length=1797577 Score = 257 bits (284), Expect = 3e-66 Identities = 207/245 (84%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 578444 TCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTT 578503 Query 76 AAACTTC-CATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 |||| || | ||| || ||| | |||||||||| |||| || || || | || Sbjct 578504 AAACCTCACCGCAGCTTGACGCCGCAGAGTCCCTCTATGAAGTGCGC-ACGGAC-AGAGA 578561 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 578562 CCGAGCGACTAAATAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 578621 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||| Sbjct 578622 CTCCACCAACTAAGAACGGCCATGCACCACTACCCAGAGAATCAAGAAAGGACAATCAAC 578681 Query 254 CTGTC 258 ||||| Sbjct 578682 CTGTC 578686 >seq9 Length=2593320 Score = 257 bits (284), Expect = 3e-66 Identities = 207/245 (84%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 293163 TCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTT 293222 Query 76 AAACTTC-CATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 |||| || | ||| || ||| | |||||||||| |||| || || || | Sbjct 293223 AAACCTCACCGCAGCTTGACGCCGCAGAGTCCCTCTATGAAGTGCGC-ACGGACAAAGAC 293281 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 ||| | | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 293282 CGA-GCGACTAAATAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 293340 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||| Sbjct 293341 CTCCACCAACTAAGAACGGCCATGCACCACTACCCAGAGAATCAAGAAAGGACAATCAAC 293400 Query 254 CTGTC 258 ||||| Sbjct 293401 CTGTC 293405 Score = 251 bits (278), Expect = 1e-64 Identities = 205/245 (84%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 164381 TCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTT 164440 Query 76 AAACTTC-CATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 |||| || | ||| || ||| | |||||||||| |||| || | || || Sbjct 164441 AAACCTCACCGCAGCTTGACGCCGCAGAGTCCCTCTATGAAGTGCGCGCGGA--CAGAGA 164498 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 164499 CCGAGCGACTAAATAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 164558 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||| Sbjct 164559 CTCCACCAACTAAGAACGGCCATGCACCACTACCCAGAGAATCAAGAAAGGACAATCAAC 164618 Query 254 CTGTC 258 ||||| Sbjct 164619 CTGTC 164623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799891934