Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq10 360 3e-97 seq9 360 3e-97 seq14 86.0 1e-14 >seq10 Length=1797577 Score = 360 bits (398), Expect = 3e-97 Identities = 257/294 (87%), Gaps = 5/294 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG--GTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||| | ||| |||| ||| ||| || | ||||||||||||||||||||||||||| Sbjct 574694 TACTAGGTGGAGTTAC---TGGCGCGCCGCGGACATCAGTAGGGTAAAACTAACCTGTCT 574750 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct 574751 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGA 574810 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 || |||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 574811 GACTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 574870 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 574871 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 574930 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | || | ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 574931 CGCACGTCTCGCGGGCAAAAAGGATCGATAGGCCATGCTTGCACAGTTTGTATT 574984 >seq9 Length=2593320 Score = 360 bits (398), Expect = 3e-97 Identities = 257/294 (87%), Gaps = 5/294 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG--GTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||| | ||| |||| ||| ||| || | ||||||||||||||||||||||||||| Sbjct 160632 TACTAGGTGGAGTTAC---TGGCGCGCCGCGGACATCAGTAGGGTAAAACTAACCTGTCT 160688 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct 160689 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGA 160748 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 || |||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160749 GACTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 160808 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 160809 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 160868 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | || | ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 160869 CGCACGTCTCGCGGGCAAAAAGGATCGATAGGCCATGCTTGCACAGTTTGTATT 160922 Score = 360 bits (398), Expect = 3e-97 Identities = 257/294 (87%), Gaps = 5/294 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG--GTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||| | ||| |||| ||| ||| || | ||||||||||||||||||||||||||| Sbjct 289425 TACTAGGTGGAGTTAC---TGGCGCGCCGCGGACATCAGTAGGGTAAAACTAACCTGTCT 289481 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct 289482 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGA 289541 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 || |||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289542 GACTTCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 289601 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 289602 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 289661 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | || | ||| ||| ||||||||||||||||| ||| || ||||||||| Sbjct 289662 CGCACGTCTCGCGGGCAAAAAGGATCGATAGGCCATGCTTGCACAGTTTGTATT 289715 >seq14 Length=35107 Score = 86.0 bits (94), Expect = 1e-14 Identities = 131/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||| | |||| ||| |||||||||||||| || ||| ||||||||||| Sbjct 30421 ACCAAACTGTCTTACGACGTTCTGAACCCAGCTCACGTACCGCTTTATTGGGTGAACAAA 30480 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 ||||| ||| ||| |||| ||||| | ||| || |||||||||||| | || Sbjct 30481 CCAACCCTTGAAACCTTATTCAGCTTC---AGGATGCGATAAGCCGACATCGAGGTGCCA 30537 Query 164 AAAAGCAACGTCGCTAT-GAA-CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 || | |||| ||| ||| | || || | | |||| ||||||||| |||||| Sbjct 30538 AACCTCCCCGTCAATATCGAATCTCTCGGGAGAGATCAGCCTGTTATCCCTAGAGTAACT 30597 Query 222 TTT 224 ||| Sbjct 30598 TTT 30600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399880384