Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10 538 1e-150 seq9 536 4e-150 >seq10 Length=1797577 Score = 538 bits (596), Expect = 1e-150 Identities = 435/527 (83%), Gaps = 33/527 (6%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || ||||||||||| ||| |||| | |||| ||||||||||||||| Sbjct 575019 CTTTTGGTCAACGTGAGATTTCTGTCCTCACTGAGCTCGCCTTGGGACACCTGCGTTATC 575078 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||||||| | |||| |||| Sbjct 575079 CTTTAACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCCCTGTCT----CCCG---- 575130 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| || || || || | ||| ||||| || | | || Sbjct 575131 --CCCGAGAGGGG----AAAGCAACAAA---------GAAGAA-------GCATAACGGA 575168 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||| || | ||| ||||||||||||||||| |||||| | |||||||| || Sbjct 575169 ATAAGCAAGACAACATCGAGGGTAGTGGTATTTCAAGGGCGCCGGA---GCTCCCACCTA 575225 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||| | |||||| | ||||| || ||||||||||| |||||||||||||||||| Sbjct 575226 TGCTACACCCCCCAAGTCGTCTCACAGAGCCGGACTAGAGTGAAGCTCAACAGGGTCTTC 575285 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct 575286 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATGGCAGATA 575345 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 575346 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 575405 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 575406 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCA 575465 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 575466 CCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 575512 >seq9 Length=2593320 Score = 536 bits (594), Expect = 4e-150 Identities = 435/527 (83%), Gaps = 31/527 (6%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || ||||||||||| ||| |||| | |||| ||||||||||||||| Sbjct 160957 CTTTTGGTCAACGTGAGATTTCTGTCCTCACTGAGCTCGCCTTGGGACACCTGCGTTATC 161016 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||||||| | |||| |||| Sbjct 161017 CTTTAACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCCCTGTCT----CCCG---- 161068 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| ||| | || || | ||| ||||| || | | || Sbjct 161069 --CCCGAGAAAGGGG--AAAGCAACAAA---------GAAGAA-------GCATAACGGA 161108 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||| || | ||| ||||||||||||||||| |||||| | |||||||| || Sbjct 161109 ATAAGCAAGACAACATCGAGGGTAGTGGTATTTCAAGGGCGCCGGA---GCTCCCACCTA 161165 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||| | |||||| | ||||| || ||||||||||| |||||||||||||||||| Sbjct 161166 TGCTACACCCCCCAAGTCGTCTCACAGAGCCGGACTAGAGTGAAGCTCAACAGGGTCTTC 161225 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct 161226 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATGGCAGATA 161285 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161286 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 161345 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161346 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCA 161405 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 161406 CCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 161452 Score = 531 bits (588), Expect = 2e-148 Identities = 436/530 (82%), Gaps = 39/530 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || ||||||||||| ||| |||| | |||| ||||||||||||||| Sbjct 289750 CTTTTGGTCAACGTGAGATTTCTGTCCTCACTGAGCTCGCCTTGGGACACCTGCGTTATC 289809 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||||||| | |||| |||| Sbjct 289810 CTTTAACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCCCTGTCT----CCCG---- 289861 Query 127 GGCCCGCGAA---GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| ||| ||| | ||| ||| ||||| || | | Sbjct 289862 --CCCGAGAAAAGGGAGC--AAC------AAA--------GAAGAA-------GCATAAC 289896 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || |||| || | ||| ||||||||||||||||| |||||| | |||||||| Sbjct 289897 GGAATAAGCAAGACAACATCGAGGGTAGTGGTATTTCAAGGGCGCCGGA---GCTCCCAC 289953 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| | |||||| | ||||| || ||||||||||| ||||||||||||||| Sbjct 289954 CTATGCTACACCCCCCAAGTCGTCTCACAGAGCCGGACTAGAGTGAAGCTCAACAGGGTC 290013 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| | || Sbjct 290014 TTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATGGCAG 290073 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290074 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 290133 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290134 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 290193 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 290194 TCACCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 290243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199771072