Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq10 111 3e-22 seq9 111 3e-22 >seq10 Length=1797577 Score = 111 bits (122), Expect = 3e-22 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| | | ||| |||||| ||||| || |||| || |||| Sbjct 574696 GTACGAGAGGAACAGTGGACTC--GGATACTTGGTTAATGCGGTTGGCTGAAGAGCCAGT 574639 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||| | |||| ||| |||||||||||||||||||||||| ||| Sbjct 574638 GCCGCGACGCTACCATCCGTCGGATAATGACTGAACGCCTCTAAGTCAGAATCCGTGC 574581 >seq9 Length=2593320 Score = 111 bits (122), Expect = 3e-22 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| | | ||| |||||| ||||| || |||| || |||| Sbjct 160634 GTACGAGAGGAACAGTGGACTC--GGATACTTGGTTAATGCGGTTGGCTGAAGAGCCAGT 160577 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||| | |||| ||| |||||||||||||||||||||||| ||| Sbjct 160576 GCCGCGACGCTACCATCCGTCGGATAATGACTGAACGCCTCTAAGTCAGAATCCGTGC 160519 Score = 111 bits (122), Expect = 3e-22 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| | | ||| |||||| ||||| || |||| || |||| Sbjct 289427 GTACGAGAGGAACAGTGGACTC--GGATACTTGGTTAATGCGGTTGGCTGAAGAGCCAGT 289370 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||| | |||| ||| |||||||||||||||||||||||| ||| Sbjct 289369 GCCGCGACGCTACCATCCGTCGGATAATGACTGAACGCCTCTAAGTCAGAATCCGTGC 289312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199888896