Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 221 1e-52 >seq2 Length=821816 Score = 221 bits (244), Expect = 1e-52 Identities = 625/947 (66%), Gaps = 26/947 (3%) Strand=Plus/Plus Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 ||||| || ||||||| |||| ||||| | ||| || ||||| | ||| || |||| | Sbjct 732364 CCACATACATGGGAAGTGCAATTGATGCCAAGTTACATACAGCAACCTCCTCGGGAGATG 732423 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | |||| ||||| ||| ||||| ||| | | || || |||| |||||| || | Sbjct 732424 TGTACTGAACAATCTCGCAACACAGGTTAGAGGATTTAATAGTACCCAGATTCTGCTGGT 732483 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | |||| |||||| |||||||| || | ||| |||| |||| ||||| | || Sbjct 732484 TCGACTTGGCATTGCAAGCATCCTTATAGAGCATAAACGGGTTGCCAGTCTCTATCTG-- 732541 Query 66171 ACT---CAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTT 66227 ||| |||| ||||| ||| || | |||| | || | ||| || | Sbjct 732542 ACTTTGCAAT-ATGGCAAACCACAGGGTCTGTGCTGGGATAGT-CTTACGACCAAGACCC 732599 Query 66228 TGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACA-GACA 66285 | | | ||||| | ||| ||| ||||| |||||||| || || | | | || Sbjct 732600 TCCATCTCGTATTTGGTGTATAGGGCCTCGAACTCATCACCCCAAACATCATATAAGCCA 732659 Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345 || |||| | ||||||||||| | ||| ||||| | || ||||| |||||| Sbjct 732660 CGG-CACTCATCGGGACACATCAGTGTCCAGTCACCGTTGGACTCAACACGCTTCATAAA 732718 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 || ||||| ||||| | || ||||| | ||| || || || |||||| ||||| Sbjct 732719 CAGGTCAGGAATCCACAAAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCACCGTG 732778 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 || ||||||||||| || || || | ||||| ||||||||||| || ||||||||||| Sbjct 732779 GTTCTTGCGCAAGTCCAGAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAGATGGC 732838 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525 || || || |||| ||||| ||||| ||||| || || ||||| |||||| | Sbjct 732839 AAAGGAACCTTTACGCTTGCCACCACCCTGGTCAACATAACGAGCAGTGGAGTTGAATAT 732898 Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585 ||| ||||| || || || ||||| ||||| ||||| || ||| | || | Sbjct 732899 ACGTAACATTGGGACTAGACCGTTGCTCTTGCCGTTGGTACCACGAATGTAAGCGCCACT 732958 Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 |||| || | |||| | || ||||||||||| || ||| ||| ||||| Sbjct 732959 GGCCCTGATCTTGTGACAAGCAAGGCCAATACCACCAGCACACTTGCTAATGAAGGCACA 733018 Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 | || || ||| ||| || || | | ||||||| |||| ||| ||| | | | || Sbjct 733019 CTGGGTCAAAGTCTCGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAAGAAACA 733078 Query 66706 --TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTA 66763 || || | || ||| || || ||| |||| | |||||| || || || || Sbjct 733079 ACTGGAC--ATCTGAGGTCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATGAGTG 733136 Query 66764 AAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCA--- 66820 ||||| | || ||| | | ||| |||| ||| | |||||| || ||| Sbjct 733137 AAGTACTTCTGACTCATCAAGTGGTAGGTCTGAATGGTACGCTCAATG---TCACCAGTG 733193 Query 66821 TGAATCCCGAGTGCACAT---CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC 66877 || || || ||| || ||||| | | || |||||| || || || | | || Sbjct 733194 TGGATACC---AGCAGATACACGCATTAACATGTGTTGAGGACGCTCCACTATCTTGTCA 733250 Query 66878 TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 || ||| | | ||| ||||| || |||| ||||| | ||||||||| Sbjct 733251 TTTATACGAAGTAAATAGGAACGCTCCAAAGTCTTCAAACCAAAGTA 733297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567932164960