Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq469 163 6e-38 >seq469 Length=1784 Score = 163 bits (180), Expect = 6e-38 Identities = 239/329 (73%), Gaps = 12/329 (4%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| ||||| || | |||| ||| ||||| || | | | Sbjct 1268 AGGGGAGTGAAATAGATTCTGAAACCAATTACTTACAGTTAGTCAGAGCCC-GTTAATGG 1210 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGAGGTTAAG 129 |||| ||||| | | ||||| |||| || ||||||| |||| || ||||||||||| Sbjct 1209 GTGATGGCGTACATCTTGCAGAATGGACCGGCGAGTTAT--GTCAACATGCGAGGTTAAG 1152 Query 130 -GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188 || || | || ||||| || |||| |||| ||||| |||||| ||| || | Sbjct 1151 TGGATTAAAGCGA---AGCCGTAGAGAAATCGAGTCTTAATAGGGCGCTTAGTATGTTGA 1095 Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248 ||||| ||||||| |||||||||||| |||||||||||| | ||||| | | Sbjct 1094 TATAGACCCGAAACCAGGTGATCTACCCATGAGCAGGTTGAA-ACTTAGTAACACTAAGT 1036 Query 249 GGAGGACCGAACCG--GTAAACGTTGAAAAGTTTTCGGAT-GACTCGCGGGTAGGGGTGA 305 |||||||||||||| ||| | | |||||| ||||| |||| | |||||||||||| Sbjct 1035 GGAGGACCGAACCGTAGTACGCCTAAAAAAGTGCCCGGATGGACTTGTGGGTAGGGGTGA 976 Query 306 AAGGCCAATCAAACTGGGAAATAGCTCGT 334 || |||||| |||| ||| |||||| || Sbjct 975 AATTCCAATCGAACTTGGAGATAGCTGGT 947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972794999808