Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq54 221 2e-55 >seq54 Length=10339 Score = 221 bits (244), Expect = 2e-55 Identities = 193/232 (83%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| |||| ||||||| ||| | Sbjct 5481 GTACAAAGGGCAGGGACGTAATCTGCACAAGCT-GATGACTTGCGCATACTAGGCATT-C 5538 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| |||||| |||||||| | | |||||||| Sbjct 5539 CTCGTTCATGATTTAGAATTGCAAAAATCAATCCCCGTCACGATGCATACT-AAAGATTA 5597 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | ||| |||| |||| |||| | |||| ||||| |||||||||||||||||||| Sbjct 5598 CCCAGCCCTTTCGGG-AAGG-GATAAAACTCGATGAATGCATCAGTGTAGCGCGCGTGCA 5655 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 5656 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCTTG 5707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996255510