Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq54 295 1e-77 >seq54 Length=10339 Score = 295 bits (326), Expect = 1e-77 Identities = 228/267 (85%), Gaps = 12/267 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 5623 ACTCGATGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 5682 Query 62 CCTGTTATTGCCTCAAACTTCCATT-GGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAG 119 ||||||||||||| |||||||| | |||| |||| | |||||||||||||||| | Sbjct 5683 CCTGTTATTGCCTTAAACTTCCTTGCGGCTTAGAGCCGCAAAGTCCCTCTAAGAAGCAAA 5742 Query 120 CC-------ACCAACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTA 171 || || |||| | | | || ||| |||||||||||||||||||||||||| Sbjct 5743 CCGTAACGGACGAACCTTTTT--ACGGACACTAGTTAGCAGGTTAAGGTCTCGTTCGTTA 5800 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5801 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAAA 5860 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 5861 GAATCAAGAAAGAGCTATCAATCTGTC 5887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796032434