Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq469 233 7e-59 >seq469 Length=1784 Score = 233 bits (258), Expect = 7e-59 Identities = 335/463 (72%), Gaps = 23/463 (5%) Strand=Plus/Plus Query 135 ACGCTGCACCTAAATGC--ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||||| |||||| || |||||| | ||||||||||||| | ||||| |||||| || Sbjct 917 ACGCTAGCCCTAAAAGCTTATTTCGAG-AGAACCAGCTATCTCCAAGTTCGATTGGAATT 975 Query 193 TCACCCCTATCCACAGGTC-ATCCCCTCAGTTTTCAA--CCTAAGTGGGTTCGGTCCTCC 249 ||||||||| ||||| ||| |||| || |||| | | || ||||||||||||| Sbjct 976 TCACCCCTACCCACAAGTCCATCCGGGCACTTTTTTAGGCGTACTACGGTTCGGTCCTCC 1035 Query 250 ACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGA 309 || || |||| | |||||||||| ||||| |||||||| | | ||||||||| | Sbjct 1036 ACTTAGTGTTACTAA-GTTTCAACCTGCTCATGGGTAGATCACCTGGTTTCGGGTCTATA 1094 Query 310 TCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACA--CGGGT 367 || ||| | ||||||||| |||||| |||| |||||||| | | | | | Sbjct 1095 TCAACATACTAAG-CGCCCTATTAAGACTCGATTTCTCTACGGCTTCGCTTTAATCCACT 1153 Query 368 TAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTG 427 ||||||||| || || ||||| || |||||| ||| | | ||||| ||||| Sbjct 1154 TAACCTCGCATGTTGACATAA-CTCGCCGGTCCATTCTGCAAGATGTACGCCATCACC-- 1210 Query 428 GTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTC 487 | | || || |||| ||| | |||| | | ||||||||| ||||||| Sbjct 1211 ---CATTAACGG-------GCTCTGACTAACTGTAAGTAATTGGTTTCAGAATCTATTTC 1260 Query 488 ACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACC 547 ||||||| || ||||| ||||||||||||||||||||||||| || | |||||||| | Sbjct 1261 ACTCCCCTCCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTGTCT 1320 Query 548 AAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 ||||||||| |||| |||||||||||| || ||||| || Sbjct 1321 GGTTAGTATTTAGCCTTACCGGGTGGTCCCGGCAAATTCAGAC 1363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817590657536