Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq469 260 3e-67 >seq469 Length=1784 Score = 260 bits (288), Expect = 3e-67 Identities = 317/417 (76%), Gaps = 19/417 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGT-CGGTTCGGTCCTCCAGTTAGTAGT 67 ||||| ||| |||| ||||||| | ||| | ||||||||||||||| ||||| || Sbjct 986 CCACAAGTCCATCCGGGCACTTTTTTAGGCGTACTACGGTTCGGTCCTCCACTTAGT-GT 1044 Query 68 TACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAG 127 ||| | ||||||||||| ||| || |||||| || ||||| ||||||||| || | Sbjct 1045 TACTAAG--TTTCAACCTGCTCATGGG-TAGATCACCTGGTTT-CGGGTCTATATCA-AC 1099 Query 128 CGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT---ATTCGGTTAAGC 184 |||| ||||||| ||||||||| ||| | ||||| || | || || | |||| | Sbjct 1100 ATACTAAGCGCCCTATTAAGACTCGATTT-CTCTACGGCTTCGCTTTAATCCACTTAACC 1158 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | || | | |||| |||| | ||||| | ||| | |||||| ||||||| || Sbjct 1159 TC-GCATGTTGACATAACTCGCCGGTCCATTCTGCAAGATGTACGCCATCACCCATTAAC 1217 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | ||||| ||| |||| | | |||||||| |||||||||||||||||| ||||| Sbjct 1218 G--GGCTCTGACTAACTGTAAGTAATTGGTTTCAGAATCTATTTCACTCCCCTC-CCGGG 1274 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAG--TAGTATTTA 362 ||||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||| Sbjct 1275 GTTCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGT--GTCTGGTTAGTATTTA 1332 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||| || ||||||| || ||||||||| ||||| ||||| ||| ||||||| Sbjct 1333 GCCTTACCGGGTGGTCCCGGCAAATTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 1389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241593618176