Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq469 167 5e-39 >seq469 Length=1784 Score = 167 bits (184), Expect = 5e-39 Identities = 297/415 (72%), Gaps = 24/415 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || |||||||| ||||||||| |||||||||||||| |||| ||| ||| ||| | || Sbjct 378 CGGCTACGCCTTTCGGCCTCGTCTTAGGACCCGACTAACCCTGGGTGGACGAACCTTGCC 437 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| ||| |||| | ||||| ||| | | | || ||||||| || | Sbjct 438 CAGGAAACCTTCCCCAATAGGCGTCAGAGATTCTCACTC-TGAATCGTTACTCATACCGG 496 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCAC--CACTGACACG 178 |||||||||| | | |||||||| | |||| |||||| | || ||| Sbjct 497 CATTCTCACTTGTAAGCGCTCCACCAGTCT-TCACAGTCTGGCTTCAATGCCCTTACA-- 553 Query 179 ACGCTCCCCTACC-CAACCACACAGGTTGCCAC-AGCTTCGGCGGATAACTTAAGCCCCG 236 |||||| |||| | || || ||||| ||||||| | ||| | |||| Sbjct 554 ACGCTCTCCTAACGCATTTTCA----TTGCCCGTAGCTTCGTTTTGTGTTTTAGGTCCCG 609 Query 237 CTACATTATCGGCGCGGAATCACTT-GACCAG-TGAGCTATTACGCACTCTTT-CAAGGA 293 | ||||||||| | || || || ||| || |||||||||||||||||||| || || Sbjct 610 TTGAATTATCGGCACAGAGTCTCTCCGACTAGGTGAGCTATTACGCACTCTTTAAAACGA 669 Query 294 TGG-CTGCTTCC-AAGCCAACCTCCT-GGTTGTCTACGCAACTCCACATCCTTTC-CCAC 349 ||| |||||||| |||||||| |||| | |||| || | ||||||||| |||||| |||| Sbjct 670 TGGCCTGCTTCCTAAGCCAACATCCTAGCTTGTTTAAGAAACTCCACAACCTTTCTCCAC 729 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTG----ATGATCTGGGCTGTTTCCCTCTCG 400 | | ||| | || ||| ||||||||| |||||||| |||| ||||| || Sbjct 730 TTA-ACACAATTTTGGGACCTTAGCTGCAGACCGATCTGGGTTGTTCCCCTCGCG 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177593947136