Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq54 228 2e-57 >seq54 Length=10339 Score = 228 bits (252), Expect = 2e-57 Identities = 213/262 (81%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTAT-CGGCTC-AAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | |||||| |||||| | |||||||| |||||||||||||||| Sbjct 5739 GCTTCTTAGAGGGACTTTGCGGCTCTAAGCCGCAAGGAAGTTTAAGGCAATAACAGGTCT 5680 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG-TTC 186 ||||||||||||||||| |||||| |||||||||||||||||| | || |||| || Sbjct 5679 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCATCGAGTTTT 5620 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 ||| |||| ||| |||| ||||||||||| ||| | ||||| |||||| || Sbjct 5619 ATC-CCTT-CCCGAAAGGGCTGGGTAATCT--TTAGTATGCATCGTGACGGGGATTGATT 5564 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||| | || | |||||||||||||||||| |||| ||||||||| | | Sbjct 5563 TTTGCAATTCTAAATCATGAACGAGGAATGCCTAGTATGCGCAAGTCATCAGCTTGTGCA 5504 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 5503 GATTACGTCCCTGCCCTTTGTA 5482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195131392