Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq469 123 8e-26 >seq469 Length=1784 Score = 123 bits (136), Expect = 8e-26 Identities = 341/499 (68%), Gaps = 29/499 (6%) Strand=Plus/Minus Query 1 TCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||| || |||||| ||| | | | |||||||||||||| |||||||||||| Sbjct 1125 TCGAGTCTTAATAGGGCGCTTAGTATGTTGATATAGACCCGAAACCAGGTGATCTACCCA 1066 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCC-ACTAATGTTGAAAA 118 || |||| |||| | | |||||| |||||| ||||||| | || | |||| Sbjct 1065 TGAGCAGGTTGAAACTTAG-TAACACTAAGTGGAGGACCGAACCGTAGTACGCCTAAAAA 1007 Query 119 ATTAGG-GGATGAGCT-GTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGT 176 | | ||||| || |||||||||||||||| | || | |||||||| ||||||||| Sbjct 1006 AGTGCCCGGATGGACTTGTGGGTAGGGGTGAAATTCCAATCGAACTTGGAGATAGCTGGT 947 Query 177 TCTCTCCGAA-AACTATTTAGG--TAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACT 233 |||||| || || |||||| ||| | | | | | ||||||||||||| Sbjct 946 TCTCTCGAAATAAGCTTTTAGGGCTAGCGTGTAGTGGTTAAGTGGATGGGGTAGAGCACT 887 Query 234 G-TTATGGCTAGGGGG-----TCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCG 287 | ||||| || || | || ||| || | | || |||||||||||| | Sbjct 886 GAATATGGAATGGCGGCGGCCTAGCTGTAACTGACTATA--AT--CAAACTCCGAATAC- 832 Query 288 CATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAG 347 |||| | | | ||| | ||| |||| ||| ||| ||| || |||| ||| Sbjct 831 TATCATGAATTGCTATGCAGTCGGTACATCGGTGATAACGTCGATGCACGCGAGGGGAAC 772 Query 348 AATCCGGA-CTAT---CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTC 403 || || || | | ||||||||| ||| |||| | |||| | | || | || Sbjct 771 AACCCAGATCGGTCTGCAGCTAAGGTCCCAAAAT-TGTGTTAAG-TGGAGAAAGGTTGTG 714 Query 404 TGATTGCTAAGAC-AGCTAGGATGTTGGCTT-GGAAGCA-GCCATTCATTTAAAGAGTGC 460 || || | || ||||||||||||||||| ||||||| ||||| |||||||||||| Sbjct 713 GAGTTTCTTAAACAAGCTAGGATGTTGGCTTAGGAAGCAGGCCATCGTTTTAAAGAGTGC 654 Query 461 GTAACAGCTCA-CTAGTCG 478 |||| |||||| ||||||| Sbjct 653 GTAATAGCTCACCTAGTCG 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689591315456