Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq395 116 6e-24 seq54 116 6e-24 >seq395 Length=1074093 Score = 116 bits (128), Expect = 6e-24 Identities = 97/116 (84%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| ||| || || |||||| |||| || |||| || |||| Sbjct 635717 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGCTTGGCTGAGAAGCCAGT 635660 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | ||||||||||||||| | ||||| ||| |||||||||||||||||||||||||| Sbjct 635659 GGCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCAT 635604 >seq54 Length=10339 Score = 116 bits (128), Expect = 6e-24 Identities = 97/116 (84%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | ||| ||| || || |||||| |||| || |||| || |||| Sbjct 1468 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGCTTGGCTGAGAAGCCAGT 1411 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | ||||||||||||||| | ||||| ||| |||||||||||||||||||||||||| Sbjct 1410 GGCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCAT 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195920896