Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq54 446 5e-123 >seq54 Length=10339 Score = 446 bits (494), Expect = 5e-123 Identities = 402/500 (80%), Gaps = 29/500 (6%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 6561 TCATTCCAATTACAAGAC----AATTGCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 6616 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6617 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 6676 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 6677 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTGCCTCGGTAGGCC 6736 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || ||| |||| || |||||| ||||||| |||||| ||| Sbjct 6737 AATACCCTACCGTC--AAGCTGATGGGTCAGAAACTTGAATGGTCCATCG------CAAA 6788 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||| | ||||||||||||||| | | || |||| | ||||||| Sbjct 6789 AAATTGCGATTCGCAAGTTTATTATGAATCACC--GAAAACCAAAAGG--GATGGTTTTA 6844 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 | |||||||| | | || || || | | | ||||||||| ||| |||| Sbjct 6845 GAACTAATAAA-----CGCCGCCAAA----AGGCCTCGAACTTGTATTAGCCCTACAATT 6895 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 | |||||||||||||| | || | || |||| |||| ||||||| | |||||||||| Sbjct 6896 AGCACGGTTATCCATG--GAAAACGAATACCAAAGAAACTATAACTGTTGTAATGAGCCA 6953 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||||| ||| | | | || ||||||||||||||||||||||||||| |||| Sbjct 6954 TTCGCAGTTTCACCGTAAAAA--GTTTGTACTTAGACATGCATGGCTTAATCTTTAAGAC 7011 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 7012 AAGCATATGACTACTGGCAG 7031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392236544