Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq232 185 7e-42 >seq232 Length=639093 Score = 185 bits (204), Expect = 7e-42 Identities = 962/1509 (64%), Gaps = 51/1509 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| |||||||||| || |||| || ||| | || || | | |||||| | ||||| Sbjct 595778 ATCAACCGTGAACTTAATAGCATCAGTAGCAGGCTGAGTACGTAAATAGTAAACCCCGGT 595719 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTC-GGCT 65195 |||||| || ||| ||||||| ||||| | | | | ||||| || |||| Sbjct 595718 CTTGAGTCCCTTCTTCCATCCATAGAAGTGCAT-GCTCGTGAGTTTGCCGAAGGAAGGCT 595660 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 ||| || || || | ||| || |||||| || | ||||||||||| |||| Sbjct 595659 GCTCCAGATAGATGTTGAGCGATTGGGACTGATCAATAAATATGCCACGATCTGCTGCCA 595600 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 | ||||||||| | || | || ||||| || |||||||||||| | | | Sbjct 595599 TATCAATGATA-GTTTTCTGTTTTATTTCCCACACTGTCTTGTACAGGT--CCTTGATGT 595543 Query 65315 ATTG--GAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG-C 65371 ||| |||| |||| |||| | | ||||| | ||||| | || || | | Sbjct 595542 GTTGAGGAATACCCTCGATGTGCCTCAAGGAACCGTTATAGGCAATCA-GCTTTTCCTTC 595484 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || | || ||| | || ||||| | || | | | || ||| | || | || Sbjct 595483 ATAGCTTCGTCCCAGAGCCCTAAATCCACGAGGTCCCGTAGCAGGTGGGGGTTTACCACA 595424 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||| ||| || ||||| ||| || |||||| ||| || || ||||| Sbjct 595423 AAGAACTCTCCGCTAAGCACACGGCGGTAGTAAATGTTGCTGGTGTATGGCTCGAAGGAC 595364 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || |||| || || ||||||| || ||||| || |||||||| || | ||||| ||| Sbjct 595363 TCGTTGTTTCCCAGGATTTGGGATGTCGATGCGGTCGGCATGGGGGCCAGGAACAACGAG 595304 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || |||| |||| | | | ||| | | | |||||||||| ||| | | || Sbjct 595303 TTACGCAGACCGTGCTTGGCCATGCGGCGCTTAAGATCGTCCCAGTCCCATAAC---TTG 595247 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | ||| ||| || ||| | || ||||| | || | ||| || || || Sbjct 595246 TTGTCCACAGTGGCGCCCCAAAGGTCGAACTGCAGCTTGCCTTTTGAGGCTGGCGATCCC 595187 Query 65672 AGGAA--ACT-AT-CGTACACTCCC--TCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGT 65725 || | ||| || ||||| || | || || | || | ||| | || || Sbjct 595186 GGGTACGACTCATACGTACCATCACGTTCGGCCAACGAAA-TAGAC---TCATCCAGACA 595131 Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 | | | ||||| |||||||| || || || |||||||| || || || ||| Sbjct 595130 ACCGTAG--TAAATCGTCTCGAATATACGGCGGTTAAGTTCCTTGGCTTCCTCAGATTCG 595073 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 |||| | |||||| | ||| ||||| |||| ||| || ||||| | ||| || || Sbjct 595072 AACGGGTAGCGCATCAGCATAAAGGTGTCCGCCAAACCCTGCACTCCTACACCAATAGGT 595013 Query 65846 CGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 | || || |||||| || | ||||||| || ||||| ||||| || | || || || Sbjct 595012 CTGTGGCGATGATTGGACACCT-TCGCCTCCGGCACAGGATAGTAGTTTCTGTCAATGAT 594954 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAA 65962 || | ||| ||| | ||| | || || ||| ||| | || ||| || Sbjct 594953 TTTGTTGAGGTTGTATGTAATGACACGG--GAGACTTCGTACAACTTTTGGAAGTC---- 594900 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | ||| |||| | | | |||| || | || || |||| || || ||| Sbjct 594899 ------GTACGTGCGGGTTTCCTTGTT--CACATACATCGGCAGCGCAATGGAAGCCAGG 594848 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || || | ||| || || | || |||| || || || |||||| ||| Sbjct 594847 TTGCACACTGCCACCTCTTCTGGGGATGTGTACTGTACGATCTCACAGCACAGGTTAGAT 594788 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||||| |||| |||||||| ||| ||| |||||||||||||||||| | | Sbjct 594787 GACTTGATGGTTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCATGCATCCTTGTAAAGC 594728 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 || | || | ||||| || | ||| | | || || |||||| | | || Sbjct 594727 ATAAAAGGGTTACCGGTTTCGATTTGACTTTGGAGAATAGCAAACCAAAGTGTTTGGGCA 594668 Query 66203 TTCACCGTACGTACCGCCCTACCTTTGC--GTTCGTAATGTTCGTAGAGGTGTTCGAAGG 66260 | || | || |||| || |||| || | || | |||||| Sbjct 594667 GGAATAGTT--TTGCGGCCTAAGCCGGCTTGTTCATATTTGGTATATAACGCTTCGAACT 594610 Query 66261 ATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCAC 66320 |||||||| || || |||| | | |||| | || ||||| || | ||| || | Sbjct 594609 CATCACCCCAAACATCATACAGTCCGCGGCACTCATCAGGGCACATTAGGGTCCAGTCGC 594550 Query 66321 CATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 ||| ||| ||||| |||||| ||||| || ||||| || || ||||| || || | Sbjct 594549 CATTTGCTTCGACACGCTTCATAAACAGATCCGGAATCCACAGTGCATAGAATAGGTCAC 594490 Query 66381 GTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGG 66440 |||| || ||||| || |||||||| |||||||| ||||| || | ||| || | Sbjct 594489 GTGCACGGCTTTCCTCGGATCCATGATTTTTCCGCAAGTCCAGGAAATCCATGATATCAG 594430 Query 66441 CATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGA 66500 | ||||||||||||| ||| ||||| || || ||| | || ||||| ||||| ||||| | Sbjct 594429 CGTGCCATGGTTCCATGTATATGGCAAATGACCCCTTGCGCTTGCCACCACCCTGGTCTA 594370 Query 66501 CGTAGCGAGCGACATTG--TTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 | || | || ||| ||||| | ||||||||| || || | || || || || Sbjct 594369 CATACCTTGC--AGTTGCATTGAATATACGCAACATTGGCACAATACCATTGCTCTTCCC 594312 Query 66559 ATTGGTGCC 66567 ||||||||| Sbjct 594311 ATTGGTGCC 594303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565509484960